RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 RAD18Q9NS91 495 aa17.36■□□□□ 0.37
LTBR-210ENST00000542830 TAAR2Q9P1P5 351 aa17.36■□□□□ 0.37
LTBR-210ENST00000542830 LRIT1Q9P2V4 623 aa17.36■□□□□ 0.37
LTBR-210ENST00000542830 RABGEF1Q9UJ41 708 aa17.36■□□□□ 0.37
LTBR-210ENST00000542830 TFR2Q9UP52 801 aa17.36■□□□□ 0.37
LTBR-210ENST00000542830 SATB2Q9UPW6 733 aa17.36■□□□□ 0.37
LTBR-210ENST00000542830 CELSR3Q9NYQ7 3312 aa17.36■□□□□ 0.37
LTBR-210ENST00000542830 ARHGEF17Q96PE2 2063 aaPredicted RBP17.36■□□□□ 0.37
LTBR-210ENST00000542830 LAMA5O15230 3695 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 CCDC187A0A096LP49 1063 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 BTNL10A8MVZ5 291 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 D6RAR5 112 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 ZW10O43264 779 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 PECAM1P16284 738 aaPredicted RBP17.35■□□□□ 0.37
LTBR-210ENST00000542830 RBMS1P29558 406 aaKnown RBP17.35■□□□□ 0.37
LTBR-210ENST00000542830 MLLT3P42568 568 aaPredicted RBP17.35■□□□□ 0.37
LTBR-210ENST00000542830 PCBP4P57723 403 aaKnown RBP17.35■□□□□ 0.37
LTBR-210ENST00000542830 COPS2P61201 443 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 CTBSQ01459 385 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 EIF3IQ13347 325 aaKnown RBP17.35■□□□□ 0.37
LTBR-210ENST00000542830 LRP8Q14114 963 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 PCSK7Q16549 785 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 C17orf82Q86X59 251 aaPredicted RBP17.35■□□□□ 0.37
LTBR-210ENST00000542830 GALNT13Q8IUC8 556 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 ZNF248Q8NDW4 579 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 LIN37Q96GY3 246 aaPredicted RBP17.35■□□□□ 0.37
LTBR-210ENST00000542830 TMEM74Q96NL1 305 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 AGAP2Q99490 1192 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 STRADBQ9C0K7 418 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 SPATS2LQ9NUQ6 558 aaKnown RBP17.35■□□□□ 0.37
LTBR-210ENST00000542830 VPS18Q9P253 973 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 SAE1Q9UBE0 346 aaPredicted RBP17.35■□□□□ 0.37
LTBR-210ENST00000542830 TMEM98Q9Y2Y6 226 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 RNF215Q9Y6U7 377 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 COL27A1Q8IZC6 1860 aaPredicted RBP17.35■□□□□ 0.37
LTBR-210ENST00000542830 ZFYVE26Q68DK2 2539 aa17.35■□□□□ 0.37
LTBR-210ENST00000542830 A0A1W2PQM1 296 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 HACD1B0YJ81 288 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 INPP4BO15327 924 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 ASMTLO95671 621 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 NDST3O95803 873 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 FGF1P05230 155 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 AK4P27144 223 aaPredicted RBP17.34■□□□□ 0.37
LTBR-210ENST00000542830 TNNT3P45378 269 aaPredicted RBP17.34■□□□□ 0.37
LTBR-210ENST00000542830 PDX1P52945 283 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 NAP1L1P55209 391 aaKnown RBP17.34■□□□□ 0.37
LTBR-210ENST00000542830 BIRC2Q13490 618 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 LLGL1Q15334 1064 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 PYCR3Q53H96 274 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 SLC30A9Q6PML9 568 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 B4GALNT4Q76KP1 1039 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 LYSMD3Q7Z3D4 306 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 SPRED1Q7Z699 444 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 TRIM74Q86UV6 250 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 ARL14Q8N4G2 192 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 PTCD2Q8WV60 388 aaKnown RBP17.34■□□□□ 0.37
LTBR-210ENST00000542830 WDR24Q96S15 920 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 RMI1Q9H9A7 625 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 FAM153AQ9UHL3 310 aa17.34■□□□□ 0.37
LTBR-210ENST00000542830 RALYQ9UKM9 306 aaKnown RBP17.34■□□□□ 0.37
LTBR-210ENST00000542830 UNC13CQ8NB66 2214 aa17.33■□□□□ 0.37
LTBR-210ENST00000542830 RHPN2P1A8MT19 583 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 MT-CYBP00156 380 aaPredicted RBP17.33■□□□□ 0.36
LTBR-210ENST00000542830 CCKBRP32239 447 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 CTNNA1P35221 906 aaKnown RBP17.33■□□□□ 0.36
LTBR-210ENST00000542830 ACTR1BP42025 376 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 MARCKSL1P49006 195 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 INHBCP55103 352 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 DCDC1P59894 354 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 ACTR1AP61163 376 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 ADCY2Q08462 1091 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 WASHC5Q12768 1159 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 BBS12Q6ZW61 710 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 MARK2Q7KZI7 788 aaKnown RBP17.33■□□□□ 0.36
LTBR-210ENST00000542830 KDELC2Q7Z4H8 507 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 TMC3Q7Z5M5 1100 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 PDZD3Q86UT5 571 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 ZC3H18Q86VM9 953 aaKnown RBP17.33■□□□□ 0.36
LTBR-210ENST00000542830 Q8N9G6 341 aaPredicted RBP17.33■□□□□ 0.36
LTBR-210ENST00000542830 SPATA22Q8NHS9 363 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 KRT35Q92764 455 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 SLC46A1Q96NT5 459 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 FERMT1Q9BQL6 677 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 ZSCAN5AQ9BUG6 496 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 GPR63Q9BZJ6 419 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 ASCL3Q9NQ33 180 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 KLHL8Q9P2G9 620 aaPredicted RBP17.33■□□□□ 0.36
LTBR-210ENST00000542830 NFKBIL1Q9UBC1 381 aaPredicted RBP17.33■□□□□ 0.36
LTBR-210ENST00000542830 EFR3BQ9Y2G0 817 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 ZNF711Q9Y462 761 aa17.33■□□□□ 0.36
LTBR-210ENST00000542830 RCCD1A6NED2 376 aa17.32■□□□□ 0.36
LTBR-210ENST00000542830 APOC4-APOC2K7ER74 178 aa17.32■□□□□ 0.36
LTBR-210ENST00000542830 CASC3O15234 703 aaKnown RBP17.32■□□□□ 0.36
LTBR-210ENST00000542830 PMPCBO75439 489 aa17.32■□□□□ 0.36
LTBR-210ENST00000542830 APOC2P02655 101 aa17.32■□□□□ 0.36
LTBR-210ENST00000542830 CETN2P41208 172 aa17.32■□□□□ 0.36
LTBR-210ENST00000542830 VAV2P52735 878 aa17.32■□□□□ 0.36
LTBR-210ENST00000542830 MAZP56270 477 aaKnown RBP17.32■□□□□ 0.36
LTBR-210ENST00000542830 XRCC4Q13426 336 aa17.32■□□□□ 0.36
LTBR-210ENST00000542830 NR1D2Q14995 579 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms