RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 GJC3Q8NFK1 279 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 OR8H1Q8NGG4 311 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 SPATA22Q8NHS9 363 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 SPATA20Q8TB22 786 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 OTULINQ96BN8 352 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 ELP4Q96EB1 424 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 PERPQ96FX8 193 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 INPP4AQ96PE3 977 aaPredicted RBP3.59□□□□□ -1.83
LEMD3-204ENST00000542032 TUBA1CQ9BQE3 449 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 LBHD1Q9BQE6 289 aaPredicted RBP3.59□□□□□ -1.83
LEMD3-204ENST00000542032 FUZQ9BT04 418 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 SLC25A18Q9H1K4 315 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 TTYH1Q9H313 450 aaPredicted RBP3.59□□□□□ -1.83
LEMD3-204ENST00000542032 TSPY26PQ9H489 355 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 UBTD1Q9HAC8 227 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 ABCF3Q9NUQ8 709 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 ALKBH4Q9NXW9 302 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 SMARCAL1Q9NZC9 954 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 MTRRQ9UBK8 725 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 SLC9A2Q9UBY0 812 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 PA2G4Q9UQ80 394 aaKnown RBP3.59□□□□□ -1.83
LEMD3-204ENST00000542032 GPRASP1Q5JY77 1395 aa3.59□□□□□ -1.83
LEMD3-204ENST00000542032 DOCK7Q96N67 2140 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 TYW5A2RUC4 315 aaKnown RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 TEX22C9J3V5 150 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 PTGES3LE9PB15 166 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 TAF4O00268 1085 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 UBE2CO00762 179 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 ATP2C2O75185 946 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 KDM4BO94953 1096 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 CLDN14O95500 239 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 SCGB1D1O95968 90 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 CLEC3BP05452 202 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 TPM2P07951 284 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 CSH1P0DML2 217 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 CSH2P0DML3 217 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 UBL4AP11441 157 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 PCNAP12004 261 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 HPDP32754 393 aaPredicted RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 ICAM3P32942 547 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 PEX19P40855 299 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 HARS2P49590 506 aaKnown RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 RPP30P78346 268 aaKnown RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 CALD1Q05682 793 aaKnown RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 ARL16Q0P5N6 197 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 ZNF155Q12901 538 aaPredicted RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 NAA25Q14CX7 972 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 PTPN14Q15678 1187 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 PKN2Q16513 984 aaKnown RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 AMZ1Q400G9 498 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 DUSP28Q4G0W2 176 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 ZNF667Q5HYK9 610 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 UNQ6126/PRO20091Q6UXV3 157 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 ATF7IPQ6VMQ6 1270 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 C9orf139Q6ZV77 190 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 KRT74Q7RTS7 529 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 FAM160B2Q86V87 743 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 ZC3HC1Q86WB0 502 aaKnown RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 LURAP1LQ8IV03 231 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 CNTROBQ8N137 903 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 ADSSL1Q8N142 457 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 KCTD6Q8NC69 237 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 RUFY2Q8WXA3 655 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 ERGIC1Q969X5 290 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 FAM120BQ96EK7 910 aaKnown RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 CNDP2Q96KP4 475 aaKnown RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 NODALQ96S42 347 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 EYA3Q99504 573 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 SPRY4Q9C004 299 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 EVA1AQ9H8M9 152 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 GRPEL1Q9HAV7 217 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 SDF2L1Q9HCN8 221 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 DDX4Q9NQI0 724 aaKnown RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 DIAPH3Q9NSV4 1193 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 PDRG1Q9NUG6 133 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 ZNF224Q9NZL3 707 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 MALT1Q9UDY8 824 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 ADAM18Q9Y3Q7 739 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 SNX8Q9Y5X2 465 aa3.58□□□□□ -1.84
LEMD3-204ENST00000542032 SOS1Q07889 1333 aaPredicted RBP3.58□□□□□ -1.84
LEMD3-204ENST00000542032 IGHV4OR15-8A0A075B7B6 117 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 NPIPB15A6NHN6 443 aaPredicted RBP3.57□□□□□ -1.84
LEMD3-204ENST00000542032 ZNF587BE7ETH6 402 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 RTCAO00442 366 aaKnown RBP3.57□□□□□ -1.84
LEMD3-204ENST00000542032 VILLO15195 856 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 MID1O15344 667 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 GRID2O43424 1007 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 ZIC3O60481 467 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 NDUFS7O75251 213 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 RFPL2O75678 378 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 NR2F1P10589 423 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 SRCP12931 536 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 AGAP20933 346 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 PSMC2P35998 433 aaKnown RBP3.57□□□□□ -1.84
LEMD3-204ENST00000542032 GPD2P43304 727 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 CTCFP49711 727 aaPredicted RBP3.57□□□□□ -1.84
LEMD3-204ENST00000542032 PPP5CP53041 499 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 RPS3AP61247 264 aaKnown RBP3.57□□□□□ -1.84
LEMD3-204ENST00000542032 TROAPQ12815 778 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms