RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 TAMM41Q96BW9 452 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 TNIP3Q96KP6 325 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 GPR22Q99680 433 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 DUSP16Q9BY84 665 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 FANCEQ9HB96 536 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 MARCH5Q9NX47 278 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 VTI1BQ9UEU0 232 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 VPS51Q9UID3 782 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 CROTQ9UKG9 612 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 SARDHQ9UL12 918 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 USP22Q9UPT9 525 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 UBDO15205 165 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 E2F6O75461 281 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 FYNP06241 537 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 NCK1P16333 377 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 MAP4P27816 1152 aaKnown RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 ADSLP30566 484 aaPredicted RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 ACADVLP49748 655 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 BCAT1P54687 386 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 AQP6Q13520 282 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 MOGQ16653 247 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 RGS21Q2M5E4 152 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 ZIK1Q3SY52 487 aaPredicted RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 CCDC92Q53HC0 331 aaPredicted RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 VARS2Q5ST30 1063 aaKnown RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 C8orf82Q6P1X6 216 aaPredicted RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 TMEM110Q86TL2 294 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 MFSD2AQ8NA29 543 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 USP33Q8TEY7 942 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 RNF139Q8WU17 664 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 SNX19Q92543 992 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 SEPT5Q99719 369 aaPredicted RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 HERC2P3Q9BVR0 1158 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 AGPAT4Q9NRZ5 378 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 TUBA8Q9NY65 449 aaPredicted RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 DNMT3BQ9UBC3 853 aaKnown RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 TSC22D4Q9Y3Q8 395 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 DHRS12A0PJE2 317 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 TRIM64BA6NI03 449 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 TOR1BO14657 336 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 TIMM44O43615 452 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 NRP2O60462 931 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 GALTP07902 379 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 HMBSP08397 361 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 ALDOCP09972 364 aaKnown RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 CES1P23141 567 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 DSC1Q08554 894 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 TRAP1Q12931 704 aaKnown RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 ATP6AP1Q15904 470 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 CTXN3Q4LDR2 81 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 UNC93AQ86WB7 457 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 SIX6OS1Q8N1H7 587 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 TNIP2Q8NFZ5 429 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 MAGEE2Q8TD90 523 aaPredicted RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 DUS3LQ96G46 650 aaKnown RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 C3orf30Q96M34 536 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 NAT9Q9BTE0 207 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 VN1R3Q9BXE9 311 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 RIC8BQ9NVN3 520 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 TMEM161AQ9NX61 479 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 BFARQ9NZS9 450 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 M0QYT0 321 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 UBFD1O14562 309 aaKnown RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 AQP9O43315 295 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 AP2A1O95782 977 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 STAU1O95793 577 aaKnown RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 SNRPB2P08579 225 aaKnown RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 CLTBP09497 229 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 ODC1P11926 461 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 CPB1P15086 417 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 MYOGP15173 224 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 SHMT2P34897 504 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 ARL4AP40617 200 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 RPS3AP61247 264 aaKnown RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 FAM189BP81408 668 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 IFITM3Q01628 133 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 DUSP4Q13115 394 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 SPIDRQ14159 915 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 ACAP2Q15057 778 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 CYBRD1Q53TN4 286 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 FBXO46Q6PJ61 603 aaPredicted RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 RNF19BQ6ZMZ0 732 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 C16orf59Q7L2K0 433 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 CADM3Q8N126 398 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 NPWQ8N729 165 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 ZNF420Q8TAQ5 688 aaPredicted RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 HEXDCQ8WVB3 486 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 CENPIQ92674 756 aaPredicted RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 HDAC10Q969S8 669 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 PHF21BQ96EK2 531 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 C11orf49Q9H6J7 331 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 CASS4Q9NQ75 786 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 CCM2LQ9NUG4 571 aaPredicted RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 ARMC1Q9NVT9 282 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 OSER1Q9NX31 292 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 SPATA7Q9P0W8 599 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 MAP10Q9P2G4 905 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 IFT80Q9P2H3 777 aaPredicted RBP9.11□□□□□ -0.95
THBS3-211ENST00000541990 SLC2A6Q9UGQ3 507 aa9.11□□□□□ -0.95
THBS3-211ENST00000541990 TBX21Q9UL17 535 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms