RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 AP3M1Q9Y2T2 418 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 M0QZQ0 153 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 PSMD12O00232 456 aaPredicted RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 RNF103O00237 685 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 PPEF2O14830 753 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 UBDO15205 165 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 CFLARO15519 480 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 ZBTB14O43829 449 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 ATP6V1G1O75348 118 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 PIGNO95427 931 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 C2P06681 752 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 JUNBP17275 347 aaPredicted RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 XRCC1P18887 633 aaPredicted RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 S100A1P23297 94 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 ATP5F1P24539 256 aaPredicted RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 MGAT1P26572 445 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 BRCC3P46736 316 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 GRIA4P48058 902 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 SERPINB10P48595 397 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 RPL34P49207 117 aaKnown RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 TAF6P49848 677 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 LILRA4P59901 499 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 ATP6V0D1P61421 351 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 BST2Q10589 180 aaKnown RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 CDH17Q12864 832 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 CEACAM7Q14002 265 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 PPP2R5DQ14738 602 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 C16orf72Q14CZ0 275 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 MLF2Q15773 248 aaPredicted RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 FAM83EQ2M2I3 478 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 RGS21Q2M5E4 152 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 ARL13BQ3SXY8 428 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 SV2CQ496J9 727 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 SLC9B1Q4ZJI4 515 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 MTX3Q5HYI7 312 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 C6orf52Q5T4I8 152 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 AGAP9Q5VTM2 703 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 FSTL4Q6MZW2 842 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 OLFML1Q6UWY5 402 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 SCARA5Q6ZMJ2 495 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 CYP4V2Q6ZWL3 525 aaPredicted RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 ERMP1Q7Z2K6 904 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 MAVSQ7Z434 540 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 MAML2Q8IZL2 1156 aaPredicted RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 GALNT4Q8N4A0 578 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 TAB3Q8N5C8 712 aaPredicted RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 DNAAF3Q8N9W5 541 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 GIPC3Q8TF64 312 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 CHPT1Q8WUD6 406 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 OSCP1Q8WVF1 389 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 ISOC1Q96CN7 298 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 CENPNQ96H22 339 aaPredicted RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 SCYL1Q96KG9 808 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 CSPG4P5Q96PW8 444 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 WDR12Q9GZL7 423 aaKnown RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 ZCWPW1Q9H0M4 648 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 PLAC1Q9HBJ0 212 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 ANKHQ9HCJ1 492 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 CASS4Q9NQ75 786 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 CCM2LQ9NUG4 571 aaPredicted RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 DNMT3BQ9UBC3 853 aaKnown RBP10.39□□□□□ -0.75
CHFR-219ENST00000541341 TSPAN16Q9UKR8 245 aa10.39□□□□□ -0.75
CHFR-219ENST00000541341 TRIM64BA6NI03 449 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 FAM170BA6NMN3 283 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 GOLGA8TH3BQL2 631 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 HTRA2O43464 458 aaPredicted RBP10.38□□□□□ -0.75
CHFR-219ENST00000541341 UGT1A9O60656 530 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 ANXA9O76027 345 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 F9P00740 461 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 HSD17B1P14061 328 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 STMN1P16949 149 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 GALK1P51570 392 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 SESN2P58004 480 aaPredicted RBP10.38□□□□□ -0.75
CHFR-219ENST00000541341 POU4F1Q01851 419 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 CSTF1Q05048 431 aaKnown RBP10.38□□□□□ -0.75
CHFR-219ENST00000541341 KRR1Q13601 381 aaKnown RBP10.38□□□□□ -0.75
CHFR-219ENST00000541341 CDO1Q16878 200 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 SLC25A52Q3SY17 297 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 CES4AQ5XG92 561 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 TPRG1Q6ZUI0 275 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 NCCRP1Q6ZVX7 275 aaPredicted RBP10.38□□□□□ -0.75
CHFR-219ENST00000541341 DPH6Q7L8W6 267 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 DGLUCYQ7Z3D6 616 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 GALNT7Q86SF2 657 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 KCNMB4Q86W47 210 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 CLVS1Q8IUQ0 354 aaPredicted RBP10.38□□□□□ -0.75
CHFR-219ENST00000541341 LRRC49Q8IUZ0 686 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 GPR65Q8IYL9 337 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 TBC1D21Q8IYX1 336 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 CHCHD4Q8N4Q1 142 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 SCAIQ8N9R8 606 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 SNX31Q8N9S9 440 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 SLC35F5Q8WV83 523 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 NXPE3Q969Y0 559 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 ZNF669Q96BR6 464 aaPredicted RBP10.38□□□□□ -0.75
CHFR-219ENST00000541341 VPS39Q96JC1 886 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 SUSD3Q96L08 255 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 AGAP3Q96P47 875 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 OSBPL10Q9BXB5 764 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 ELOVL4Q9GZR5 314 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms