RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 KRT10P13645 584 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 MYOD1P15172 320 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 ITGA2P17301 1181 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 KCNA5P22460 613 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 RGS2P41220 211 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 FASLGP48023 281 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 CCR9P51686 369 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 KRT81Q14533 505 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 FRG2Q64ET8 278 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 ZNF280DQ6N043 979 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 BRAT1Q6PJG6 821 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 GDPD4Q6W3E5 623 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 MEX3BQ6ZN04 569 aaKnown RBP5.89□□□□□ -1.47
YBX3-210ENST00000540975 DPPA4Q7L190 304 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 DSG4Q86SJ6 1040 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 ZNF329Q86UD4 541 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 KBTBD3Q8NAB2 608 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 BBS10Q8TAM1 723 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 HMGCLL1Q8TB92 370 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 SMARCE1Q969G3 411 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 HARBI1Q96MB7 349 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 FBRSL1Q9HCM7 1045 aaKnown RBP5.89□□□□□ -1.47
YBX3-210ENST00000540975 ACSL5Q9ULC5 683 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 GRID2O43424 1007 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 RTN3O95197 1032 aaPredicted RBP5.88□□□□□ -1.47
YBX3-210ENST00000540975 CRYAAP02489 173 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 UMODP07911 640 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 GNL1P36915 607 aaPredicted RBP5.88□□□□□ -1.47
YBX3-210ENST00000540975 USP8P40818 1118 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 DECR1Q16698 335 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 JAKMIP3Q5VZ66 844 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 SLC9B2Q86UD5 537 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 SRBD1Q8N5C6 995 aaKnown RBP5.88□□□□□ -1.47
YBX3-210ENST00000540975 LMNTD1Q8N9Z9 388 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 TMEM116Q8NCL8 245 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 OR13A1Q8NGR1 328 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 ETNPPLQ8TBG4 499 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 FAM149B1Q96BN6 582 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 PERPQ96FX8 193 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 SLC28A3Q9HAS3 691 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 RUSC2Q8N2Y8 1516 aa5.88□□□□□ -1.47
YBX3-210ENST00000540975 C16orf97H3BN30 126 aa5.87□□□□□ -1.47
YBX3-210ENST00000540975 ISL1P61371 349 aa5.87□□□□□ -1.47
YBX3-210ENST00000540975 RBBP5Q15291 538 aaKnown RBP5.87□□□□□ -1.47
YBX3-210ENST00000540975 TSTQ16762 297 aaKnown RBP5.87□□□□□ -1.47
YBX3-210ENST00000540975 ACCSLQ4AC99 568 aa5.87□□□□□ -1.47
YBX3-210ENST00000540975 DCST1Q5T197 706 aa5.87□□□□□ -1.47
YBX3-210ENST00000540975 STPG1Q5TH74 334 aa5.87□□□□□ -1.47
YBX3-210ENST00000540975 NRROSQ86YC3 692 aa5.87□□□□□ -1.47
YBX3-210ENST00000540975 OR5R1Q8NH85 324 aa5.87□□□□□ -1.47
YBX3-210ENST00000540975 PIGTQ969N2 578 aa5.87□□□□□ -1.47
YBX3-210ENST00000540975 RRNAD1Q96FB5 475 aaKnown RBP5.87□□□□□ -1.47
YBX3-210ENST00000540975 SYT17Q9BSW7 474 aa5.87□□□□□ -1.47
YBX3-210ENST00000540975 OR2W1Q9Y3N9 320 aa5.87□□□□□ -1.47
YBX3-210ENST00000540975 GREB1LQ9C091 1923 aaPredicted RBP5.86□□□□□ -1.47
YBX3-210ENST00000540975 PTPRCP08575 1304 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 A0A1W2PQF6 199 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 C1orf226A1L170 272 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 JRKO75564 520 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 TMEM63AO94886 807 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 ATP1A1P05023 1023 aaKnown RBP5.86□□□□□ -1.47
YBX3-210ENST00000540975 CETPP11597 493 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 HOXC9P31274 260 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 KRT9P35527 623 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 PBX3P40426 434 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 APOBEC1P41238 236 aaKnown RBP5.86□□□□□ -1.47
YBX3-210ENST00000540975 CLCN3P51790 818 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 F2RL1P55085 397 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 CEBPZQ03701 1054 aaKnown RBP5.86□□□□□ -1.47
YBX3-210ENST00000540975 GTF2H2Q13888 395 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 TBCEQ15813 527 aaPredicted RBP5.86□□□□□ -1.47
YBX3-210ENST00000540975 CDONQ4KMG0 1287 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 C18orf63Q68DL7 685 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 GTF2H2CQ6P1K8 395 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 ASB18Q6ZVZ8 466 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 NR4A3Q92570 626 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 TAAR8Q969N4 342 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 TRMT61BQ9BVS5 477 aaKnown RBP5.86□□□□□ -1.47
YBX3-210ENST00000540975 MMP28Q9H239 520 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 IRAK4Q9NWZ3 460 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 ADAM18Q9Y3Q7 739 aa5.86□□□□□ -1.47
YBX3-210ENST00000540975 MLYCDO95822 493 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 CLEC3BP05452 202 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 BSGP35613 385 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 TAS2R38P59533 333 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 RPS3AP61247 264 aaKnown RBP5.85□□□□□ -1.47
YBX3-210ENST00000540975 EEF1A1P68104 462 aaKnown RBP5.85□□□□□ -1.47
YBX3-210ENST00000540975 CSTF3Q12996 717 aaKnown RBP5.85□□□□□ -1.47
YBX3-210ENST00000540975 CCDC96Q2M329 555 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 GFI1BQ5VTD9 330 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 EEF1A1P5Q5VTE0 462 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 CYP20A1Q6UW02 462 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 TMPRSS12Q86WS5 348 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 DCUN1D3Q8IWE4 304 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 CIARTQ8N365 385 aaPredicted RBP5.85□□□□□ -1.47
YBX3-210ENST00000540975 IL17RCQ8NAC3 791 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 ARHGEF26Q96DR7 871 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 QRFPRQ96P65 431 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 POLR1BQ9H9Y6 1135 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 RANGRFQ9HD47 186 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms