RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 SUDS3Q9H7L9 328 aaPredicted RBP19.28■□□□□ 0.68
RAP1B-221ENST00000540209 GLOD4Q9HC38 313 aa19.28■□□□□ 0.68
RAP1B-221ENST00000540209 SPATS2LQ9NUQ6 558 aaKnown RBP19.28■□□□□ 0.68
RAP1B-221ENST00000540209 SATB2Q9UPW6 733 aa19.28■□□□□ 0.68
RAP1B-221ENST00000540209 REXO2Q9Y3B8 237 aaKnown RBP19.28■□□□□ 0.68
RAP1B-221ENST00000540209 UNC13CQ8NB66 2214 aa19.28■□□□□ 0.68
RAP1B-221ENST00000540209 RGSL1A5PLK6 1076 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 D6RAR5 112 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 NUDT21O43809 227 aaKnown RBP19.27■□□□□ 0.68
RAP1B-221ENST00000540209 AK4P27144 223 aaPredicted RBP19.27■□□□□ 0.68
RAP1B-221ENST00000540209 ADCY8P40145 1251 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 CCL7P80098 99 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 CTBSQ01459 385 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 C3orf38Q5JPI3 329 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 LYSMD3Q7Z3D4 306 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 C17orf82Q86X59 251 aaPredicted RBP19.27■□□□□ 0.68
RAP1B-221ENST00000540209 SPATA22Q8NHS9 363 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 P3H4Q92791 437 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 EID2BQ96D98 161 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 RBM41Q96IZ5 413 aaKnown RBP19.27■□□□□ 0.68
RAP1B-221ENST00000540209 ZNF578Q96N58 590 aaPredicted RBP19.27■□□□□ 0.68
RAP1B-221ENST00000540209 GFM1Q96RP9 751 aaKnown RBP19.27■□□□□ 0.68
RAP1B-221ENST00000540209 CDH19Q9H159 772 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 SYNDIG1Q9H7V2 258 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 ASCL3Q9NQ33 180 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 PKD2L2Q9NZM6 624 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 TAAR2Q9P1P5 351 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 TMEM98Q9Y2Y6 226 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.27■□□□□ 0.68
RAP1B-221ENST00000540209 RNF215Q9Y6U7 377 aa19.27■□□□□ 0.68
RAP1B-221ENST00000540209 BTNL10A8MVZ5 291 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 MT-CYBP00156 380 aaPredicted RBP19.26■□□□□ 0.67
RAP1B-221ENST00000540209 FGF1P05230 155 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 RPLP0P05388 317 aaKnown RBP19.26■□□□□ 0.67
RAP1B-221ENST00000540209 CTNNA1P35221 906 aaKnown RBP19.26■□□□□ 0.67
RAP1B-221ENST00000540209 CDK18Q07002 472 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 WASHC5Q12768 1159 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 PPP2R5EQ16537 467 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 PCSK7Q16549 785 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 PYCR3Q53H96 274 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 RAD9BQ6WBX8 426 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 KDELC2Q7Z4H8 507 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 SPRED1Q7Z699 444 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 CCDC50Q8IVM0 306 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 CCHCR1Q8TD31 782 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 ZDHHC1Q8WTX9 485 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 PRR11Q96HE9 360 aaPredicted RBP19.26■□□□□ 0.67
RAP1B-221ENST00000540209 CALR3Q96L12 384 aaKnown RBP19.26■□□□□ 0.67
RAP1B-221ENST00000540209 OR2M4Q96R27 311 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 LRRN3Q9H3W5 708 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 FAM83DQ9H4H8 585 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 MAGEE1Q9HCI5 957 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 LRIT1Q9P2V4 623 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 CNOT6Q9ULM6 557 aaKnown RBP19.26■□□□□ 0.67
RAP1B-221ENST00000540209 PCDHGA8Q9Y5G5 932 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 DUSP10Q9Y6W6 482 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 MGAQ8IWI9 3026 aa19.26■□□□□ 0.67
RAP1B-221ENST00000540209 SMG1Q96Q15 3661 aaKnown RBP19.26■□□□□ 0.67
RAP1B-221ENST00000540209 FADS2P1A8MWK0 482 aa19.25■□□□□ 0.67
RAP1B-221ENST00000540209 INPP4BO15327 924 aa19.25■□□□□ 0.67
RAP1B-221ENST00000540209 RRP8O43159 456 aaKnown RBP19.25■□□□□ 0.67
RAP1B-221ENST00000540209 IPO7O95373 1038 aaKnown RBP19.25■□□□□ 0.67
RAP1B-221ENST00000540209 ITPKBP27987 946 aa19.25■□□□□ 0.67
RAP1B-221ENST00000540209 CD68P34810 354 aaPredicted RBP19.25■□□□□ 0.67
RAP1B-221ENST00000540209 ABCG1P45844 678 aa19.25■□□□□ 0.67
RAP1B-221ENST00000540209 ERVPABLB-1P60509 514 aa19.25■□□□□ 0.67
RAP1B-221ENST00000540209 SLC30A9Q6PML9 568 aa19.25■□□□□ 0.67
RAP1B-221ENST00000540209 BBS12Q6ZW61 710 aa19.25■□□□□ 0.67
RAP1B-221ENST00000540209 B3GNT8Q7Z7M8 397 aa19.25■□□□□ 0.67
RAP1B-221ENST00000540209 ZC3H18Q86VM9 953 aaKnown RBP19.25■□□□□ 0.67
RAP1B-221ENST00000540209 CCNJLQ8IV13 435 aa19.25■□□□□ 0.67
RAP1B-221ENST00000540209 LIN37Q96GY3 246 aaPredicted RBP19.25■□□□□ 0.67
RAP1B-221ENST00000540209 ZFYVE1Q9HBF4 777 aa19.25■□□□□ 0.67
RAP1B-221ENST00000540209 VPS18Q9P253 973 aa19.25■□□□□ 0.67
RAP1B-221ENST00000540209 OAS3Q9Y6K5 1087 aaKnown RBP19.25■□□□□ 0.67
RAP1B-221ENST00000540209 PTPRQQ9UMZ3 2332 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 PMS2P1A4D2B8 440 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 MTSS1O43312 755 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 PIRTP0C851 137 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 MAZP56270 477 aaKnown RBP19.24■□□□□ 0.67
RAP1B-221ENST00000540209 DCDC1P59894 354 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 COPS2P61201 443 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 MARK2Q7KZI7 788 aaKnown RBP19.24■□□□□ 0.67
RAP1B-221ENST00000540209 ZNF438Q7Z4V0 828 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 TMC3Q7Z5M5 1100 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 PDZD3Q86UT5 571 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 TMEM139Q8IV31 216 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 NAGSQ8N159 534 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 WDR36Q8NI36 951 aaKnown RBP19.24■□□□□ 0.67
RAP1B-221ENST00000540209 HAUS1Q96CS2 278 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 CRELD1Q96HD1 420 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 SLC46A1Q96NT5 459 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 QKIQ96PU8 341 aaKnown RBP eCLIP19.24■□□□□ 0.673e-8■■■■■ 46.3
RAP1B-221ENST00000540209 LACRTQ9GZZ8 138 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 NFKBIL1Q9UBC1 381 aaPredicted RBP19.24■□□□□ 0.67
RAP1B-221ENST00000540209 ZNF711Q9Y462 761 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 PLEKHM1Q9Y4G2 1056 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 PCDHA3Q9Y5H8 950 aa19.24■□□□□ 0.67
RAP1B-221ENST00000540209 PCYT1BQ9Y5K3 369 aaPredicted RBP19.24■□□□□ 0.67
RAP1B-221ENST00000540209 ATMQ13315 3056 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms