RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 SEC14L4Q9UDX3 406 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 C2CD4BA6NLJ0 364 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ARHGEF33A8MVX0 844 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 A8MX80 341 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 FAM47E-STBD1D6RA91 191 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 EEF2KO00418 725 aaKnown RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 HAT1O14929 419 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 MPZL2O60487 215 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 H6PDO95479 791 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 CRTAMO95727 393 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 IL1BP01584 269 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 IL6P05231 212 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 AKR1A1P14550 325 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 HTR7P34969 479 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 NDST1P52848 882 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 THOP1P52888 689 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ZBTB6Q15916 424 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 GPR162Q16538 588 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 OCLNQ16625 522 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 GOLGA7BQ2TAP0 167 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 PYDC2Q56P42 97 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 MPP5Q8N3R9 675 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 OR5T2Q8NGG2 359 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 IPCEF1Q8WWN9 437 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ZC3H10Q96K80 434 aaKnown RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 UROC1Q96N76 676 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 SLA2Q9H6Q3 261 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ZNFX1Q9P2E3 1918 aaKnown RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 BCLAF3A2AJT9 711 aaKnown RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 INPP4BO15327 924 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 SSNA1O43805 119 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ALDH1A1P00352 501 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 THEGLP0DJG4 465 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 TRIM32Q13049 653 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 RNASEH2BQ5TBB1 312 aaKnown RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 AMIGO1Q86WK6 493 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ACOT12Q8WYK0 555 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 SNX19Q92543 992 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 C18orf25Q96B23 403 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 GFM1Q96RP9 751 aaKnown RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 SLC9A7Q96T83 725 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 CLPBQ9H078 707 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 EPB41L4BQ9H329 900 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 TASP1Q9H6P5 420 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 TCF7L2Q9NQB0 619 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 CD274Q9NZQ7 290 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ZNF624Q9P2J8 865 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 TSPAN16Q9UKR8 245 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 PLA2G4CQ9UP65 541 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 TMEM5Q9Y2B1 443 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 PTCH2Q9Y6C5 1203 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 CARNS1A5YM72 827 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 A6NL46 340 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 PRR5-ARHGAP8B1AHC4 643 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ORC5O43913 435 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 SSX5O60225 188 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 PSKH1P11801 424 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 MAGEA6P43360 314 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 LHX1P48742 406 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 PSMD4P55036 377 aaKnown RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ARHGAP8P85298 464 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 PWP1Q13610 501 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 NOMO1Q15155 1222 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 CCNYL2Q5T2Q4 361 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ALG1LQ6GMV1 187 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 KCTD8Q6ZWB6 473 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 WDTC1Q8N5D0 677 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 KCTD13Q8WZ19 329 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 OCEL1Q9H607 264 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 RETREG1Q9H6L5 497 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 IMPAD1Q9NX62 359 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ANK1P16157 1881 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 RGSL1A5PLK6 1076 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 E7ESA3 106 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 TNFRSF10AO00220 468 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 PLD2O14939 933 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 HS6ST1O60243 411 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 FAM155BO75949 473 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 YBX3P16989 372 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 AKT1P31749 480 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 RPL9P32969 192 aaKnown RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 RGS7P49802 495 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 BCAR1P56945 870 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ATP6V0D1P61421 351 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 S100A12P80511 92 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 IMPG1Q17R60 797 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 TMEM44Q2T9K0 475 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 RBM48Q5RL73 367 aaKnown RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 STXBP5Q5T5C0 1151 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 MFSD14CQ5VZR4 134 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 C9orf57Q5W0N0 161 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 PROSER1Q86XN7 944 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 UNC5BQ8IZJ1 945 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ANKRD49Q8WVL7 239 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 TRAPPC12Q8WVT3 735 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 MYLPFQ96A32 169 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 S100PBPQ96BU1 408 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 CNDP2Q96KP4 475 aaKnown RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ZNF347Q96SE7 839 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms