RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 GAB4Q2WGN9 574 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 ATAT1Q5SQI0 421 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 RBM20Q5T481 1227 aaKnown RBP9.64□□□□□ -0.87
MDH1-215ENST00000539945 HECTD2Q5U5R9 776 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 FAM45BPQ6NSW5 357 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 LYSMD3Q7Z3D4 306 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 C12orf40Q86WS4 652 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 ZSWIM9Q86XI8 627 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 CENPLQ8N0S6 344 aaPredicted RBP9.64□□□□□ -0.87
MDH1-215ENST00000539945 OR2A12Q8NGT7 310 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 RDH11Q8TC12 318 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 FAM45AQ8TCE6 357 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 EID2BQ96D98 161 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 SCRN2Q96FV2 425 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 TSNARE1Q96NA8 513 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 GPR78Q96P69 363 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 MCCC1Q96RQ3 725 aaPredicted RBP9.64□□□□□ -0.87
MDH1-215ENST00000539945 MECRQ9BV79 373 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 TSSK1BQ9BXA7 367 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 S1PR5Q9H228 398 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 EBF3Q9H4W6 596 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 ECT2Q9H8V3 914 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 ZFYVE1Q9HBF4 777 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 ZFP14Q9HCL3 533 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 ZNF358Q9NW07 568 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 COPG2Q9UBF2 871 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 FKBPLQ9UIM3 349 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 CDH22Q9UJ99 828 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 MID2Q9UJV3 735 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 SLC8A2Q9UPR5 921 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 ARL2BPQ9Y2Y0 163 aa9.64□□□□□ -0.87
MDH1-215ENST00000539945 RANBP2P49792 3224 aaKnown RBP9.64□□□□□ -0.87
MDH1-215ENST00000539945 ATXN2Q99700 1313 aaKnown RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 OTOL1A6NHN0 477 aaPredicted RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 TTC34A8MYJ7 566 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 G3V2L1 256 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 PFDN6O15212 129 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 WISP3O95389 354 aaPredicted RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 GRK2P25098 689 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 MC4RP32245 332 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 RECQLP46063 649 aaPredicted RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 TTPAP49638 278 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 KPNA2P52292 529 aaKnown RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 POLR2LP62875 67 aaKnown RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 IRX4P78413 519 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 XIAPP98170 497 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 BST1Q10588 318 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 PEX6Q13608 980 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 CHI3L2Q15782 390 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 TUSC1Q2TAM9 212 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 AARS2Q5JTZ9 985 aaKnown RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 RNF187Q5TA31 235 aaPredicted RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 TANGO2Q6ICL3 276 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 GDPD4Q6W3E5 623 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 YTHDF3Q7Z739 585 aaKnown RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 TBC1D1Q86TI0 1168 aaPredicted RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 CBARPQ8N350 705 aaPredicted RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 PAF1Q8N7H5 531 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 PNPLA1Q8N8W4 532 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 KDM1BQ8NB78 822 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 CHST14Q8NCH0 376 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 OR6Y1Q8NGX8 325 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 TTC8Q8TAM2 541 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 CYB5D2Q8WUJ1 264 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 KCTD4Q8WVF5 259 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 LPGAT1Q92604 370 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 LRIG1Q96JA1 1093 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 ZFYVE19Q96K21 471 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 UBXN10Q96LJ8 280 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 C7orf26Q96N11 449 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 NDNQ99608 321 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 OLFM1Q99784 485 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 HEPHQ9BQS7 1158 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 ARHGAP9Q9BRR9 750 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 CIPCQ9C0C6 399 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 ZDHHC6Q9H6R6 413 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 POPDC3Q9HBV1 291 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 BPIFA1Q9NP55 256 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 HPS4Q9NQG7 708 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 ELOVL2Q9NXB9 296 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 LMCD1Q9NZU5 365 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 CLEC1BQ9P126 229 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 KLHL14Q9P2G3 628 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 DEC1Q9P2X7 70 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 RUVBL2Q9Y230 463 aaKnown RBP9.63□□□□□ -0.87
MDH1-215ENST00000539945 CRYL1Q9Y2S2 319 aa9.63□□□□□ -0.87
MDH1-215ENST00000539945 PRRC2BQ5JSZ5 2229 aaKnown RBP9.62□□□□□ -0.87
MDH1-215ENST00000539945 C1orf232A0A0U1RR37 186 aa9.62□□□□□ -0.87
MDH1-215ENST00000539945 CCT8L1PA6NM43 557 aa9.62□□□□□ -0.87
MDH1-215ENST00000539945 TARM1B6A8C7 271 aa9.62□□□□□ -0.87
MDH1-215ENST00000539945 BNIP3LO60238 219 aa9.62□□□□□ -0.87
MDH1-215ENST00000539945 NDUFS3O75489 264 aa9.62□□□□□ -0.87
MDH1-215ENST00000539945 CLDN7O95471 211 aa9.62□□□□□ -0.87
MDH1-215ENST00000539945 SLC4A1P02730 911 aa9.62□□□□□ -0.87
MDH1-215ENST00000539945 SERPINE1P05121 402 aa9.62□□□□□ -0.87
MDH1-215ENST00000539945 TROVE2P10155 538 aaKnown RBP eCLIP9.62□□□□□ -0.87
MDH1-215ENST00000539945 FGF3P11487 239 aaPredicted RBP9.62□□□□□ -0.87
MDH1-215ENST00000539945 CD9P21926 228 aa9.62□□□□□ -0.87
MDH1-215ENST00000539945 FDXRP22570 491 aa9.62□□□□□ -0.87
MDH1-215ENST00000539945 SUOXP51687 545 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms