RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 APCDD1Q8J025 514 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 RBFAQ8N0V3 343 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 RYBPQ8N488 228 aaPredicted RBP10.13□□□□□ -0.79
SPARC-209ENST00000539687 CPSF7Q8N684 471 aaKnown RBP10.13□□□□□ -0.79
SPARC-209ENST00000539687 TXNDC5Q8NBS9 432 aaKnown RBP10.13□□□□□ -0.79
SPARC-209ENST00000539687 CEP70Q8NHQ1 597 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 ACTRT2Q8TDY3 377 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 WFIKKN2Q8TEU8 576 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 PIH1D2Q8WWB5 315 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 IRF7Q92985 503 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 ULK4Q96C45 1275 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 LRIG1Q96JA1 1093 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 CCT7Q99832 543 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 EBF4Q9BQW3 602 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 SUDS3Q9H7L9 328 aaPredicted RBP10.13□□□□□ -0.79
SPARC-209ENST00000539687 GTSE1Q9NYZ3 720 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 KLHL42Q9P2K6 505 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 FKBPLQ9UIM3 349 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 ACTL7AQ9Y615 435 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 TRIOBPQ9H2D6 2365 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 PRR5-ARHGAP8B1AHC4 643 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 EIF3FO00303 357 aaPredicted RBP10.12□□□□□ -0.79
SPARC-209ENST00000539687 PRMT5O14744 637 aaPredicted RBP10.12□□□□□ -0.79
SPARC-209ENST00000539687 VPS4BO75351 444 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 MLYCDO95822 493 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 PIRTP0C851 137 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 PABPC1P11940 636 aaKnown RBP10.12□□□□□ -0.79
SPARC-209ENST00000539687 SRCP12931 536 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 NCF2P19878 526 aaPredicted RBP10.12□□□□□ -0.79
SPARC-209ENST00000539687 MPSTP25325 297 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 FMO4P31512 558 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 PGM1P36871 562 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 RGS4P49798 205 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 RAP1GDS1P52306 607 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 ARHGAP8P85298 464 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 ZXDBP98169 803 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 ECT2LQ008S8 904 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 TEAD2Q15562 447 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 ZNF77Q15935 545 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 PTPRNQ16849 979 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 MYLK3Q32MK0 819 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 TRMT5Q32P41 509 aaKnown RBP10.12□□□□□ -0.79
SPARC-209ENST00000539687 TTLL9Q3SXZ7 439 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 HSF5Q4G112 596 aaPredicted RBP10.12□□□□□ -0.79
SPARC-209ENST00000539687 CARD16Q5EG05 197 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 ZNF678Q5SXM1 525 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 C22orf39Q6P5X5 142 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 ZNF549Q6P9A3 640 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 C16orf89Q6UX73 402 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 TPRG1Q6ZUI0 275 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 TAS2R42Q7RTR8 314 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 MAVSQ7Z434 540 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 TTC7BQ86TV6 843 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 CUZD1Q86UP6 607 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 RP9Q8TA86 221 aaKnown RBP10.12□□□□□ -0.79
SPARC-209ENST00000539687 GRIN3AQ8TCU5 1115 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 DTX3LQ8TDB6 740 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 HCAR2Q8TDS4 363 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 SLC22A17Q8WUG5 538 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 STMN2Q93045 179 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 ECHDC3Q96DC8 303 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 PDLIM5Q96HC4 596 aaKnown RBP10.12□□□□□ -0.79
SPARC-209ENST00000539687 MAELQ96JY0 434 aaKnown RBP10.12□□□□□ -0.79
SPARC-209ENST00000539687 LMLNQ96KR4 655 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 HTATIP2Q9BUP3 242 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 BBS2Q9BXC9 721 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 OSBPL1AQ9BXW6 950 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 TM6SF2Q9BZW4 377 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 CLPBQ9H078 707 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 LMAN2LQ9H0V9 348 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 ALG9Q9H6U8 611 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 MRPL40Q9NQ50 206 aaKnown RBP10.12□□□□□ -0.79
SPARC-209ENST00000539687 SPHK2Q9NRA0 654 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 TAS2R1Q9NYW7 299 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 ARMCX1Q9P291 453 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 BCAP29Q9UHQ4 241 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 EVLQ9UI08 416 aaPredicted RBP10.12□□□□□ -0.79
SPARC-209ENST00000539687 RNF112Q9ULX5 631 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 PPIL1Q9Y3C6 166 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 COL6A3P12111 3177 aa10.12□□□□□ -0.79
SPARC-209ENST00000539687 ANKRD36A6QL64 1941 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 HELZP42694 1942 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 PTPRSQ13332 1948 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 GLYATL1P3A0A0U1RQE8 302 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 C1orf232A0A0U1RR37 186 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 LINC01553A4QN01 128 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 RGSL1A5PLK6 1076 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 HIDE1A8MVS5 230 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 WASH3PC4AMC7 463 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 CCL22O00626 93 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 GIPC1O14908 333 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 BUD23O43709 281 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 SNX2O60749 519 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 CLASP2O75122 1294 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 TM7SF2O76062 418 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 SUPT7LO94864 414 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 S100BP04271 92 aaPredicted RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 CHRNGP07510 517 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 SRPRAP08240 638 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 FGF4P08620 206 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms