RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 IGF2-ASQ6U949 168 aa12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 PROSER1Q86XN7 944 aa12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 LRRC8AQ8IWT6 810 aa12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 TRAM1L1Q8N609 369 aa12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 NXPE2Q96DL1 559 aa12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 DEPDC7Q96QD5 511 aa12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 RIOK2Q9BVS4 552 aaKnown RBP12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 HEMGNQ9BXL5 484 aa12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 CCDC86Q9H6F5 360 aaKnown RBP12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 CYP4F12Q9HCS2 524 aa12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 FEZ2Q9UHY8 353 aaPredicted RBP12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 GPR34Q9UPC5 381 aa12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 AAR2Q9Y312 384 aaKnown RBP12.24□□□□□ -0.45
CLTCL1-205ENST00000538828 TRABD2BA6NFA1 517 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 C5orf60A6NFR6 353 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 TMX2-CTNND1H3BSU7 103 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 NTN3O00634 580 aaPredicted RBP12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 ZW10O43264 779 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 NUDT21O43809 227 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 NFKB1P19838 968 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 RBL1P28749 1068 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 CLCNKAP51800 687 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 EIF3EP60228 445 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 NR1D2Q14995 579 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 SLC1A5Q15758 541 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 PYCR3Q53H96 274 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 GUSBP11Q6P575 273 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 EFL1Q7Z2Z2 1120 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 LYSMD3Q7Z3D4 306 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 RD3Q7Z3Z2 195 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 TAF8Q7Z7C8 310 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 LSMEM2Q8N112 164 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 SPATA22Q8NHS9 363 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 ZCCHC14Q8WYQ9 949 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 SCAMP4Q969E2 229 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 LRRC45Q96CN5 670 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 EID2BQ96D98 161 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 MRGPRX2Q96LB1 330 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 SPATA13Q96N96 652 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 VPS35Q96QK1 796 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 DESI2Q9BSY9 194 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 CEP41Q9BYV8 373 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 TMEM168Q9H0V1 697 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 ABCG4Q9H172 646 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 CARD9Q9H257 536 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 CARS2Q9HA77 564 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 ARNT2Q9HBZ2 717 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 CNOT6Q9ULM6 557 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 SUFUQ9UMX1 484 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 ZNF711Q9Y462 761 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 CAPN6Q9Y6Q1 641 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 PKD1L2Q7Z442 2459 aa12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 ZFC3H1O60293 1989 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-205ENST00000538828 ZZEF1O43149 2961 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 GOLGA6CA6NDK9 693 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 GOLGA6BA6NDN3 693 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 NOBOXO60393 691 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 PMPCBO75439 489 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 DXOO77932 396 aaKnown RBP12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 FUCA1P04066 466 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 CCDC175P0C221 793 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 GOLGA6DP0CG33 693 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 STIP1P31948 543 aaKnown RBP12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 ADCY8P40145 1251 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 PDE1BQ01064 536 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 TARDBPQ13148 414 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 GALNT3Q14435 633 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 HLTFQ14527 1009 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 PRPSAP1Q14558 356 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 PTPRRQ15256 657 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 C14orf28Q4W4Y0 310 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 CCDC157Q569K6 752 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 ANKRD20A2Q5SQ80 823 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 CERCAMQ5T4B2 595 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 ANKRD20A1Q5TYW2 823 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 ANKRD20A3Q5VUR7 823 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 RANBP10Q6VN20 620 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 ZNF438Q7Z4V0 828 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 NRROSQ86YC3 692 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 FAM46DQ8NEK8 389 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 SLC35B2Q8TB61 432 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 MAPK15Q8TD08 544 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 RTP4Q96DX8 246 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 OXNAD1Q96HP4 312 aaPredicted RBP12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 OR2M4Q96R27 311 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 HERPUD2Q9BSE4 406 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 GPR63Q9BZJ6 419 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 TRIM39Q9HCM9 518 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 MRPL40Q9NQ50 206 aaKnown RBP12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 GOLGA6AQ9NYA3 693 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 TRIM10Q9UDY6 481 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 RSPH14Q9UHP6 348 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 ZMIZ1Q9ULJ6 1067 aa12.22□□□□□ -0.45
CLTCL1-205ENST00000538828 CPED1A4D0V7 1026 aa12.21□□□□□ -0.45
CLTCL1-205ENST00000538828 VEGFDO43915 354 aa12.21□□□□□ -0.45
CLTCL1-205ENST00000538828 NUAK1O60285 661 aa12.21□□□□□ -0.45
CLTCL1-205ENST00000538828 KCNJ13O60928 360 aa12.21□□□□□ -0.45
CLTCL1-205ENST00000538828 DNAJC6O75061 913 aa12.21□□□□□ -0.45
CLTCL1-205ENST00000538828 CELA2BP08218 269 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms