RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 TRIB2Q92519 343 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 NTAN1Q96AB6 310 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 AURKBQ96GD4 344 aaPredicted RBP18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 RNF145Q96MT1 663 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 SIAEQ9HAT2 523 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 AS3MTQ9HBK9 375 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 SLC2A6Q9UGQ3 507 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 CACNG3O60359 315 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 HUS1O60921 280 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 XYLBO75191 536 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 BDNFP23560 247 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 EDNRBP24530 442 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 EEFSECP57772 596 aaKnown RBP18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 GRB7Q14451 532 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 RPS6KA2Q15349 733 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 C6orf141Q5SZD1 244 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 DSG4Q86SJ6 1040 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 CCDC117Q8IWD4 279 aaPredicted RBP18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 SCML4Q8N228 414 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 CHST13Q8NET6 341 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 DPF3Q92784 378 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 RDH12Q96NR8 316 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 THG1LQ9NWX6 298 aaKnown RBP18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 GIMAP2Q9UG22 337 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 A0A087WZ62 844 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 A0A1W2PP18 115 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 TOR1BO14657 336 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 AURKAO14965 403 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 DDNO94850 711 aaPredicted RBP18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 PRSS23O95084 383 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 SCAPQ12770 1279 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 SF3B4Q15427 424 aaKnown RBP eCLIP18.53■□□□□ 0.563e-7■■■■■ 28.4
SFSWAP-207ENST00000538548 DPY19L1Q2PZI1 675 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 SYPL2Q5VXT5 272 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 KIAA0930Q6ICG6 404 aaPredicted RBP18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 PROSER1Q86XN7 944 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 RIMKLAQ8IXN7 391 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 CLEC4FQ8N1N0 589 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 TSPAN17Q96FV3 270 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 FDXACB1Q9BRP7 624 aaPredicted RBP18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 TREX1Q9NSU2 369 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 PCDHGA8Q9Y5G5 932 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 NOX1Q9Y5S8 564 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 SNX5Q9Y5X3 404 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 BRCA1P38398 1863 aaKnown RBP18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 LOC285556D6RIA3 1793 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 FZD9O00144 591 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 UPK1AO00322 258 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 SLC22A1O15245 554 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 HPRP00739 348 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 FGF4P08620 206 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 RCVRNP35243 200 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 SH3BP2P78314 561 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 SLC14A2Q15849 920 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 ARL13BQ3SXY8 428 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 UNC50Q53HI1 259 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 CATSPERGQ6ZRH7 1159 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 CATSPER4Q7RTX7 472 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 CHDHQ8NE62 594 aaPredicted RBP18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 OR7A2PQ8NGA2 310 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 TWIST2Q8WVJ9 160 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 V9GYQ6 96 aa18.53■□□□□ 0.56
SFSWAP-207ENST00000538548 TYW5A2RUC4 315 aaKnown RBP18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 PIP5K1BO14986 540 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 GABARAPO95166 117 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 NTRK1P04629 796 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 LBPP18428 481 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 HERVK_113P63132 956 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 ILF2Q12905 390 aaKnown RBP18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 FXNQ16595 210 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 FSCN1Q16658 493 aaKnown RBP18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 IMPG1Q17R60 797 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 ATP6V0D2Q8N8Y2 350 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 SPATA22Q8NHS9 363 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 TMBIM1Q969X1 311 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 ASB2Q96Q27 587 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 ERVK-6Q9BXR3 956 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 DSEQ9UL01 958 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 PTGDR2Q9Y5Y4 395 aa18.52■□□□□ 0.56
SFSWAP-207ENST00000538548 BMP4P12644 408 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 CDH1P12830 882 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 TCF3P15923 654 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 HRH2P25021 359 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 HTR1EP28566 365 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 TKTP29401 623 aaKnown RBP18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 SERPINB10P48595 397 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 APLP1P51693 650 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 CLCN5P51795 746 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 NFKB2Q00653 900 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 ECT2LQ008S8 904 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 TNFAIP1Q13829 316 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 TIGD2Q4W5G0 525 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 DENND5AQ6IQ26 1287 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 SPNS2Q8IVW8 549 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 LRRC52Q8N7C0 313 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 SLC2A13Q96QE2 648 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 TOR3AQ9H497 397 aa18.52■□□□□ 0.55
SFSWAP-207ENST00000538548 M0R3G1 203 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 HBP1O60381 514 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms