RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 LAYNQ6UX15 382 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 EMC1Q8N766 993 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 OR13J1Q8NGT2 312 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 NDNFQ8TB73 568 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 UBXN10Q96LJ8 280 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 AGAP4Q96P64 663 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 DEPDC7Q96QD5 511 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 VPS35Q96QK1 796 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 TMEM246Q9BRR3 403 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 ACE2Q9BYF1 805 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 DSN1Q9H410 356 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 ACSS2Q9NR19 701 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 GMPR2Q9P2T1 348 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 CAB39Q9Y376 341 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 Q9Y3F1 56 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 NRCAMQ92823 1304 aa11.34□□□□□ -0.59
SEMA4D-221ENST00000537934 HAS3O00219 553 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 TREHO43280 583 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 NDUFS2O75306 463 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 CABYRO75952 493 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 GPIP06744 558 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 HTR1AP08908 422 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 POLR2CP19387 275 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 SPRP35270 261 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 ETV3P41162 512 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 NAGLUP54802 743 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 BCAR1P56945 870 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 OSTNP61366 133 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 GEN1Q17RS7 908 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 DPY19L1Q2PZI1 675 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 CATSPEREQ5SY80 951 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 ATAD3CQ5T2N8 411 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 CXCL17Q6UXB2 119 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 IDO2Q6ZQW0 420 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 THAP5Q7Z6K1 395 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 CCDC103Q8IW40 242 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 HACE1Q8IYU2 909 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 LGI2Q8N0V4 545 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 SVOPQ8N4V2 548 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 KDM1BQ8NB78 822 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 DYNC2LI1Q8TCX1 351 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 SLC22A17Q8WUG5 538 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 SGCDQ92629 289 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 ROPN1LQ96C74 230 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 CPB2Q96IY4 423 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 RBBP8Q99708 897 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 BTBD2Q9BX70 525 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 SLC7A5P2Q9GIP4 190 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 CCDC167Q9P0B6 97 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 UBA2Q9UBT2 640 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 CASP8AP2Q9UKL3 1982 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 POLR1CO15160 346 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 SEPT4O43236 478 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 NDST3O95803 873 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 OXTRP30559 389 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 NUDT1P36639 197 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 GP2P55259 537 aaKnown RBP11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 CRADDP78560 199 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 FCHO2Q0JRZ9 810 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 BNIP2Q12982 314 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 POU6F1Q14863 301 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 AMHR2Q16671 573 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 PTPN20Q4JDL3 420 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 PITRM1Q5JRX3 1037 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 ATF7IP2Q5U623 682 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 STEAP3Q658P3 488 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 TUBA3EQ6PEY2 450 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 PEBP4Q96S96 227 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 NAT9Q9BTE0 207 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 DHX35Q9H5Z1 703 aaKnown RBP11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 CDHR5Q9HBB8 845 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 ANKHQ9HCJ1 492 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 GIMAP4Q9NUV9 329 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 ACTR3BQ9P1U1 418 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 HES2Q9Y543 173 aa11.33□□□□□ -0.6
SEMA4D-221ENST00000537934 CENPXA8MT69 81 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 APOL1O14791 398 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 ZW10O43264 779 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 ERVK-10P10266 1014 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 CTRB1P17538 263 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 LIMK2P53671 638 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 KRR1Q13601 381 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 CRY1Q16526 586 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 CTRB2Q6GPI1 263 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 FSTL4Q6MZW2 842 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 ZNF544Q6NX49 715 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 ADAMTSL2Q86TH1 951 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 ZNF598Q86UK7 904 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 CDKL3Q8IVW4 592 aaPredicted RBP11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 TMEM192Q8IY95 271 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 AFAP1L2Q8N4X5 818 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 IL17RDQ8NFM7 739 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 ARNTL2Q8WYA1 636 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 GLMNQ92990 594 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 NFKBIZQ9BYH8 718 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 PTPRHQ9HD43 1115 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 DDX28Q9NUL7 540 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 SRRDQ9UH36 339 aa11.32□□□□□ -0.6
SEMA4D-221ENST00000537934 KIAA1257Q9ULG3 409 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms