RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 CANT1Q8WVQ1 401 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 MTRRQ9UBK8 725 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 PDCD11Q14690 1871 aaKnown RBP13.95□□□□□ -0.18
LIG1-203ENST00000536218 ZNF487B1APH4 448 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 DEAF1O75398 565 aaPredicted RBP13.95□□□□□ -0.18
LIG1-203ENST00000536218 MOCS2O96007 188 aaPredicted RBP13.95□□□□□ -0.18
LIG1-203ENST00000536218 PRKCHP24723 683 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 CCR10P46092 362 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 ACLYP53396 1101 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 CRTC3Q6UUV7 619 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 CAMK1DQ8IU85 385 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 PCSK9Q8NBP7 692 aaKnown RBP13.95□□□□□ -0.18
LIG1-203ENST00000536218 PDPRQ8NCN5 879 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 RAB2BQ8WUD1 216 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 ACBD6Q9BR61 282 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 ABCB10Q9NRK6 738 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 ABI2Q9NYB9 513 aaPredicted RBP13.95□□□□□ -0.18
LIG1-203ENST00000536218 IFT80Q9P2H3 777 aaPredicted RBP13.95□□□□□ -0.18
LIG1-203ENST00000536218 ANGPTL3Q9Y5C1 460 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 CCDC78A2IDD5 438 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 KCNU1A8MYU2 1149 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 CENPBD1B2RD01 187 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 TRDMT1O14717 391 aaKnown RBP13.95□□□□□ -0.18
LIG1-203ENST00000536218 MAN1A2O60476 641 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 ALDOAP04075 364 aaKnown RBP13.95□□□□□ -0.18
LIG1-203ENST00000536218 CHRNGP07510 517 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 TYK2P29597 1187 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 NUMBP49757 651 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 SEPHS1P49903 392 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 LSM3P62310 102 aaKnown RBP13.95□□□□□ -0.18
LIG1-203ENST00000536218 SEMA5AQ13591 1074 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 POLD3Q15054 466 aaPredicted RBP13.95□□□□□ -0.18
LIG1-203ENST00000536218 PITRM1Q5JRX3 1037 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 NAPRTQ6XQN6 538 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 GK5Q6ZS86 529 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 RNF180Q86T96 592 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 LRRC49Q8IUZ0 686 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 THEM5Q8N1Q8 247 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 MCUQ8NE86 351 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 OR13F1Q8NGS4 319 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 PSMA8Q8TAA3 256 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 CD99L2Q8TCZ2 262 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 LHPPQ9H008 270 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 IRF2BPLQ9H1B7 796 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 PNPLA8Q9NP80 782 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 VPS28Q9UK41 221 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 UGT2A1Q9Y4X1 527 aa13.95□□□□□ -0.18
LIG1-203ENST00000536218 TRPM7Q96QT4 1865 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 DCLK1O15075 740 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 SYNCRIPO60506 623 aaKnown RBP13.94□□□□□ -0.18
LIG1-203ENST00000536218 TPPPO94811 219 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 LRIG2O94898 1065 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 SLC7A1P30825 629 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 KRT6CP48668 564 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 HARS2P49590 506 aaKnown RBP13.94□□□□□ -0.18
LIG1-203ENST00000536218 SERPINB9P50453 376 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 ARPP19P56211 112 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 DSC3Q14574 896 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 RAB41Q5JT25 222 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 TJAP1Q5JTD0 557 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 RTN4RL1Q86UN2 441 aaPredicted RBP13.94□□□□□ -0.18
LIG1-203ENST00000536218 SPATA2LQ8IUW3 424 aaPredicted RBP13.94□□□□□ -0.18
LIG1-203ENST00000536218 MINDY2Q8NBR6 621 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 GPR152Q8TDT2 470 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 MIR1-1HGQ9H1L0 117 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 ADNPQ9H2P0 1102 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 GMPR2Q9P2T1 348 aaKnown RBP13.94□□□□□ -0.18
LIG1-203ENST00000536218 ZNF638Q14966 1978 aaKnown RBP13.94□□□□□ -0.18
LIG1-203ENST00000536218 HACD1B0YJ81 288 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 XYLBO75191 536 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 NADKO95544 446 aaPredicted RBP13.94□□□□□ -0.18
LIG1-203ENST00000536218 ALDH4A1P30038 563 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 YWHAHQ04917 246 aaPredicted RBP13.94□□□□□ -0.18
LIG1-203ENST00000536218 SLC39A12Q504Y0 691 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 BHLHA9Q7RTU4 235 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 ELMOD2Q8IZ81 293 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 OR52K1Q8NGK4 314 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 APBB2Q92870 758 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 RCOR3Q9P2K3 495 aaPredicted RBP13.94□□□□□ -0.18
LIG1-203ENST00000536218 CRNNQ9UBG3 495 aaPredicted RBP13.94□□□□□ -0.18
LIG1-203ENST00000536218 SPEF1Q9Y4P9 236 aa13.94□□□□□ -0.18
LIG1-203ENST00000536218 CKBP12277 381 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 TPSB2P20231 275 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 ELK4P28324 431 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 TPSAB1Q15661 275 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 DLG2Q15700 870 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 PCSK7Q16549 785 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 TBCELQ5QJ74 424 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 GLB1LQ6UWU2 654 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 ARMC8Q8IUR7 673 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 PSTKQ8IV42 348 aaKnown RBP13.93□□□□□ -0.18
LIG1-203ENST00000536218 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.93□□□□□ -0.18
LIG1-203ENST00000536218 SNX31Q8N9S9 440 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 DNAAF3Q8N9W5 541 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 RAET1EQ8TD07 263 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 HCAR2Q8TDS4 363 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 B3GALT6Q96L58 329 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 CITED4Q96RK1 184 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 MAGEE1Q9HCI5 957 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 BOLA1Q9Y3E2 137 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms