RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 Q8N9G6 341 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 CCDC112Q8NEF3 446 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 ZNF548Q8NEK5 533 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 CCDC148Q8NFR7 591 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 OR6B3Q8NGW1 331 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 LEO1Q8WVC0 666 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 ASB10Q8WXI3 467 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 STARD8Q92502 1023 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 ERCC4Q92889 916 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 WBP2Q969T9 261 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 ZBTB45Q96K62 511 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 SPATA17Q96L03 361 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 ACBD6Q9BR61 282 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 SLC25A23Q9BV35 468 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 LRRC2Q9BYS8 371 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 C22orf23Q9BZE7 217 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 CCSER2Q9H7U1 834 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 PLEKHA5Q9HAU0 1116 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 SERGEFQ9UGK8 458 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 CHORDC1Q9UHD1 332 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 PADI4Q9UM07 663 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 DMTF1Q9Y222 760 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 SLC27A6Q9Y2P4 619 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 KLF2Q9Y5W3 355 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 ANK1P16157 1881 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 UNC119BA6NIH7 251 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 GOLGA8AA7E2F4 631 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 SLC31A1O15431 190 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 CLDN3O15551 220 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 AQP9O43315 295 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 SLC37A4O43826 429 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 EDIL3O43854 480 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 PRLP01236 227 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 ANXA6P08133 673 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 CLTAP09496 248 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 CCL4P13236 92 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 PRLRP16471 622 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 GOT1P17174 413 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 YWHAQP27348 245 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 NUDT1P36639 197 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 LIFRP42702 1097 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 MAGEA11P43364 429 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 PSMD8P48556 350 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 PDE1AP54750 535 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 ADPRHP54922 357 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 ST8SIA6P61647 398 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 ROM1Q03395 351 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 OCA2Q04671 838 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 STRN3Q13033 797 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 ERV3-1Q14264 604 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 TMEM132DQ14C87 1099 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 CST6Q15828 149 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 ZBTB6Q15916 424 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 CFAP221Q4G0U5 840 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 ANKRD45Q5TZF3 282 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 SPATA1Q5VX52 437 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 RINT1Q6NUQ1 792 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 JMJD6Q6NYC1 403 aaPredicted RBP4.03□□□□□ -1.76
YBX3-205ENST00000536107 VSTM1Q6UX27 236 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 DOK3Q7L591 496 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 FJX1Q86VR8 437 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 CEP97Q8IW35 865 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 NRSN1Q8IZ57 195 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 PDCL2Q8N4E4 241 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 CISD2Q8N5K1 135 aaKnown RBP4.03□□□□□ -1.76
YBX3-205ENST00000536107 CELF2-AS1Q8N7Q2 184 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 DDI1Q8WTU0 396 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 FBXO32Q969P5 355 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 ZBTB9Q96C00 473 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 TAAR9Q96RI9 348 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 SMR3AQ99954 134 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 RSPH9Q9H1X1 276 aaPredicted RBP4.03□□□□□ -1.76
YBX3-205ENST00000536107 LRRN3Q9H3W5 708 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 MTG2Q9H4K7 406 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 MRPL40Q9NQ50 206 aaKnown RBP4.03□□□□□ -1.76
YBX3-205ENST00000536107 ASF1BQ9NVP2 202 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.03□□□□□ -1.76
YBX3-205ENST00000536107 SIRPGQ9P1W8 387 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 FZD4Q9ULV1 537 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 POLHQ9Y253 713 aa4.03□□□□□ -1.76
YBX3-205ENST00000536107 LOC101059948A0A1B0GTJ6 334 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 TTC26A0AVF1 554 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 WDR91A4D1P6 747 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 ZSCAN5CA6NGD5 496 aaPredicted RBP4.02□□□□□ -1.77
YBX3-205ENST00000536107 KPNA7A9QM74 516 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 F8VP50 259 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 PIRO00625 290 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 NTN3O00634 580 aaPredicted RBP4.02□□□□□ -1.77
YBX3-205ENST00000536107 KCNN4O15554 427 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 ZBTB43O43298 467 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 LATO43561 262 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 CCNT1O60563 726 aaKnown RBP4.02□□□□□ -1.77
YBX3-205ENST00000536107 DPM1O60762 260 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 KATNA1O75449 491 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 TOM1L1O75674 476 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 DNAJB5O75953 348 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 LYPLA2O95372 231 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 IL1BP01584 269 aa4.02□□□□□ -1.77
YBX3-205ENST00000536107 ATP5BP06576 529 aaKnown RBP4.02□□□□□ -1.77
YBX3-205ENST00000536107 CYP11B2P19099 503 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms