RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 ITGA8P53708 1063 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SLC5A3P53794 718 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 DRG2P55039 364 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 MFAP3P55082 362 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 EIF3EP60228 445 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SKP1P63208 163 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 ARF5P84085 180 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 TAP2Q03519 686 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 ZNF844Q08AG5 666 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 TRIM25Q14258 630 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 PUM1Q14671 1186 aaKnown RBP eCLIP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 VEPH1Q14D04 833 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 EMC2Q15006 297 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 KARSQ15046 597 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 DHCR24Q15392 516 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SSX2Q16385 188 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 NKPD1Q17RQ9 610 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 AASDHQ4L235 1098 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 FAM47CQ5HY64 1035 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 C1orf185Q5T7R7 199 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 DDI2Q5TDH0 399 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 FAM91A1Q658Y4 838 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SLC25A24Q6NUK1 477 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 DARS2Q6PI48 645 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 BHLHB9Q6PI77 547 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 CCDC137Q6PK04 289 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 LAYNQ6UX15 382 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 RFX8Q6ZV50 586 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 C16orf59Q7L2K0 433 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 KCNK18Q7Z418 384 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 ARPINQ7Z6K5 226 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 NT5DC3Q86UY8 548 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 COL23A1Q86Y22 540 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SPACA3Q8IXA5 215 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 PPIL6Q8IXY8 311 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 KBTBD2Q8IY47 623 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 GRAMD1CQ8IYS0 662 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 FIBCD1Q8N539 461 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 C2orf69Q8N8R5 385 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 OR6B3Q8NGW1 331 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 MOSPD2Q8NHP6 518 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 RNASE11Q8TAA1 199 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 HM13Q8TCT9 377 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 BLOC1S5Q8TDH9 187 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 GATAD2BQ8WXI9 593 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 IP6K1Q92551 441 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 CELF1Q92879 486 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 HMCESQ96FZ2 354 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 CCDC74BQ96LY2 380 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 PPP3R2Q96LZ3 170 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 QRFPRQ96P65 431 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 QKIQ96PU8 341 aaKnown RBP eCLIP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 TREX2Q9BQ50 279 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 TCEAL7Q9BRU2 100 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 FAM213AQ9BRX8 229 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 WNT10AQ9GZT5 417 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 METTL9Q9H1A3 318 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 C1orf21Q9H246 121 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 BLZF1Q9H2G9 400 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 IKZF4Q9H2S9 585 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 METTL8Q9H825 291 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 AGO3Q9H9G7 860 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 MCCC2Q9HCC0 563 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 HMG20AQ9NP66 347 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SARS2Q9NP81 518 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 NT5MQ9NPB1 228 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 GSN-AS1Q9NRJ2 163 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 PLSCR4Q9NRQ2 329 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 MBNL3Q9NUK0 354 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 ACOXLQ9NUZ1 547 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 DNAJC28Q9NX36 388 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 TAS2R3Q9NYW6 316 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 MAT2BQ9NZL9 334 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 CCDC59Q9P031 241 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SH3BP4Q9P0V3 963 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 ZSWIM5Q9P217 1185 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 POLLQ9UGP5 575 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 AFF4Q9UHB7 1163 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 RUVBL2Q9Y230 463 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SLC5A6Q9Y289 635 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 NDUFAF1Q9Y375 327 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 NR2E1Q9Y466 385 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 NUBP2Q9Y5Y2 271 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 FKBP7Q9Y680 259 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SUPT6HQ7KZ85 1726 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 PNPLA7Q6ZV29 1317 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SYNJ2O15056 1496 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 DENND4BO75064 1496 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 COL15A1P39059 1388 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 ABHD14A-ACY1A0A1B0GW23 586 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 A0A1W2PRG0 241 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 KRT87PA6NCN2 255 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 SMIM23A6NLE4 172 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 CENPXA8MT69 81 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 C12orf71A8MTZ7 269 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 LEUTXA8MZ59 168 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 AHRRA9YTQ3 701 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 I3L4J1 428 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 MEIS1O00470 390 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 PPEF2O14830 753 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms