RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 STX1AQ16623 288 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.8□□□□□ -0.2
CCDC84-208ENST00000534656 LRRC66Q68CR7 880 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 MARK2Q7KZI7 788 aaKnown RBP13.8□□□□□ -0.2
CCDC84-208ENST00000534656 ZNF765Q7L2R6 523 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 ARHGAP22Q7Z5H3 698 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 TRIM74Q86UV6 250 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 ZNF761Q86XN6 746 aaPredicted RBP13.8□□□□□ -0.2
CCDC84-208ENST00000534656 SFRP1Q8N474 314 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 TEX26Q8N6G2 289 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 OR10G6Q8NH81 332 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 EXD1Q8NHP7 514 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 SLC37A2Q8TED4 501 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 HSPH1Q92598 858 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 SCAMP4Q969E2 229 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 COX14Q96I36 57 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 SLC45A3Q96JT2 553 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 SLC38A3Q99624 504 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 ZMYND15Q9H091 742 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 MRPL47Q9HD33 250 aaKnown RBP13.8□□□□□ -0.2
CCDC84-208ENST00000534656 NT5MQ9NPB1 228 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCDC84-208ENST00000534656 MYO1AQ9UBC5 1043 aa13.8□□□□□ -0.2
CCDC84-208ENST00000534656 A0A0J9YYE9 177 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 DDX3XO00571 662 aaKnown RBP eCLIP13.79□□□□□ -0.22e-6■□□□□ 9.5
CCDC84-208ENST00000534656 DUX1O43812 170 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 MAP3K6O95382 1288 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 TRBC1P01850 177 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 RARAP10276 462 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 MAP4P27816 1152 aaKnown RBP13.79□□□□□ -0.2
CCDC84-208ENST00000534656 PRKCIP41743 596 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 PPM1FP49593 454 aaPredicted RBP13.79□□□□□ -0.2
CCDC84-208ENST00000534656 MC2RQ01718 297 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 WDR74Q6RFH5 385 aaPredicted RBP13.79□□□□□ -0.2
CCDC84-208ENST00000534656 GALNT13Q8IUC8 556 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 LRRC49Q8IUZ0 686 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 NLGN4XQ8N0W4 816 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 NLGN4YQ8NFZ3 816 aaPredicted RBP13.79□□□□□ -0.2
CCDC84-208ENST00000534656 RTP4Q96DX8 246 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 TRIM11Q96F44 468 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 SMIM14Q96QK8 99 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 AGAP2Q99490 1192 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 PCDH18Q9HCL0 1135 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 AIPL1Q9NZN9 384 aa13.79□□□□□ -0.2
CCDC84-208ENST00000534656 HECTD1Q9ULT8 2610 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 LOC101059948A0A1B0GTJ6 334 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 A8MU76 341 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 INPP4BO15327 924 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 NKX2-8O15522 239 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 ASMTLO95671 621 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 EML2O95834 649 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 MYBL1P10243 752 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 MAN1A1P33908 653 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 STC1P52823 247 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 HHEXQ03014 270 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 ITKQ08881 620 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 SKIDA1Q1XH10 827 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 SNAP47Q5SQN1 464 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 E4F1Q66K89 784 aaPredicted RBP13.78□□□□□ -0.2
CCDC84-208ENST00000534656 TXNRD3NBQ6F5E7 133 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 CEACAM20Q6UY09 585 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 RAVER1Q8IY67 606 aaKnown RBP13.78□□□□□ -0.2
CCDC84-208ENST00000534656 TEKT4Q8WW24 435 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 KIAA1143Q96AT1 154 aaPredicted RBP13.78□□□□□ -0.2
CCDC84-208ENST00000534656 CTRCQ99895 268 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 ZPBPQ9BS86 351 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 EFHD1Q9BUP0 239 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 RIOK2Q9BVS4 552 aaKnown RBP13.78□□□□□ -0.2
CCDC84-208ENST00000534656 POLR1EQ9GZS1 481 aaKnown RBP13.78□□□□□ -0.2
CCDC84-208ENST00000534656 ISCUQ9H1K1 167 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 EPN3Q9H201 632 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 GPN2Q9H9Y4 310 aaPredicted RBP13.78□□□□□ -0.2
CCDC84-208ENST00000534656 SARS2Q9NP81 518 aaKnown RBP13.78□□□□□ -0.2
CCDC84-208ENST00000534656 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
CCDC84-208ENST00000534656 FBXO8Q9NRD0 319 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 VPS18Q9P253 973 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 ZNHIT2Q9UHR6 403 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 MAST4O15021 2626 aa13.78□□□□□ -0.2
CCDC84-208ENST00000534656 DNAJC6O75061 913 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 CES1P23141 567 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 CASRP41180 1078 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 EPHB1P54762 984 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 KLHL30Q0D2K2 578 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 ABHD18Q0P651 414 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 PIGHQ14442 188 aaPredicted RBP13.77□□□□□ -0.21
CCDC84-208ENST00000534656 ALG1LQ6GMV1 187 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 IYDQ6PHW0 289 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 CHST15Q7LFX5 561 aaPredicted RBP13.77□□□□□ -0.21
CCDC84-208ENST00000534656 TIPARPQ7Z3E1 657 aaKnown RBP13.77□□□□□ -0.21
CCDC84-208ENST00000534656 AOPEPQ8N6M6 819 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 NCSTNQ92542 709 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 SH3KBP1Q96B97 665 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 STN1Q9H668 368 aaKnown RBP13.77□□□□□ -0.21
CCDC84-208ENST00000534656 TBC1D29Q9UFV1 150 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 ANAPC2Q9UJX6 822 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 DNPEPQ9ULA0 475 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 PRKAB1Q9Y478 270 aa13.77□□□□□ -0.21
CCDC84-208ENST00000534656 TMEM184BQ9Y519 407 aaPredicted RBP13.77□□□□□ -0.21
CCDC84-208ENST00000534656 PCYT1BQ9Y5K3 369 aaPredicted RBP13.77□□□□□ -0.21
CCDC84-208ENST00000534656 CLDN7O95471 211 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms