RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 PLCL1Q15111 1095 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 PARP15Q460N3 678 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 CHPFQ8IZ52 775 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 ZNF276Q8N554 614 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 UBR7Q8N806 425 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 ZNF614Q8N883 585 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 ZNF366Q8N895 744 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 OR9Q1Q8NGQ5 310 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 DENND1AQ8TEH3 1009 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 TWIST2Q8WVJ9 160 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 COPS8Q99627 209 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 RIBC2Q9H4K1 309 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 C6orf203Q9P0P8 240 aaPredicted RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 ALDOAP04075 364 aaKnown RBP12.38□□□□□ -0.43
RAD50-209ENST00000533482 ITGB1P05556 798 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 CHI3L1P36222 383 aaPredicted RBP12.38□□□□□ -0.43
RAD50-209ENST00000533482 ACTR3P61158 418 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 ACSM2AQ08AH3 577 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 MOGSQ13724 837 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 ADRM1Q16186 407 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 ACSM2BQ68CK6 577 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 STK40Q8N2I9 435 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 TSSK3Q96PN8 268 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.38□□□□□ -0.431e-7■■□□□ 11.9
RAD50-209ENST00000533482 LEF1Q9UJU2 399 aaPredicted RBP12.38□□□□□ -0.43
RAD50-209ENST00000533482 HS3ST4Q9Y661 456 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 A0A1B0GVM2 712 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 TCAF2A6NFQ2 919 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 DLX3O60479 287 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 MLYCDO95822 493 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 CHRNA1P02708 482 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 C8AP07357 584 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 ANXA5P08758 320 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 SYN1P17600 705 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 PPM1AP35813 382 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 UBE3AQ05086 875 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 TRIP4Q15650 581 aaPredicted RBP12.38□□□□□ -0.43
RAD50-209ENST00000533482 RAET1GQ6H3X3 334 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 MAMDC4Q6UXC1 1216 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 C14orf80Q86SX3 495 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 PIM3Q86V86 326 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 CPNE9Q8IYJ1 553 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 PARP8Q8N3A8 854 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 GPR156Q8NFN8 814 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 CXCL16Q9H2A7 254 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 FAM124BQ9H5Z6 455 aaPredicted RBP12.38□□□□□ -0.43
RAD50-209ENST00000533482 EBF2Q9HAK2 575 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 MIEF1Q9NQG6 463 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 ZDHHC2Q9UIJ5 367 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 TNPO3Q9Y5L0 923 aaKnown RBP12.38□□□□□ -0.43
RAD50-209ENST00000533482 RP1L1Q8IWN7 2480 aaPredicted RBP12.38□□□□□ -0.43
RAD50-209ENST00000533482 IFRD1O00458 451 aaPredicted RBP12.38□□□□□ -0.43
RAD50-209ENST00000533482 SCAMP1O15126 338 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 GSNP06396 782 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 DNAJB7Q7Z6W7 309 aaPredicted RBP12.38□□□□□ -0.43
RAD50-209ENST00000533482 ZC3HC1Q86WB0 502 aaKnown RBP12.38□□□□□ -0.43
RAD50-209ENST00000533482 SYT12Q8IV01 421 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 OR10T2Q8NGX3 314 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 PTCD3Q96EY7 689 aaKnown RBP12.38□□□□□ -0.43
RAD50-209ENST00000533482 MYO19Q96H55 970 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 ZNF570Q96NI8 536 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 SLC7A5P2Q9GIP4 190 aa12.38□□□□□ -0.43
RAD50-209ENST00000533482 E7ESA3 106 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 PRMT5O14744 637 aaPredicted RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 SLC25A14O95258 325 aaPredicted RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 XRCC1P18887 633 aaPredicted RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 MAPK1P28482 360 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 SERPINB10P48595 397 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 MLLT6P55198 1093 aaPredicted RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 SGCGQ13326 291 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 MTA1Q13330 715 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 SLC5A9Q2M3M2 681 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 MS4A4AQ96JQ5 239 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 FCRL3Q96P31 734 aaPredicted RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 FCRL5Q96RD9 977 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 SMAD5Q99717 465 aaKnown RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 GPR62Q9BZJ7 368 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 POLR3HQ9Y535 204 aaPredicted RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 CCDC162PA2VCL2 907 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 OR2AG2A6NM03 316 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 SNUPNO95149 360 aaKnown RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 CNPP09543 421 aaKnown RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 RPL5P46777 297 aaKnown RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 THOP1P52888 689 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 CRTC3Q6UUV7 619 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 TRMOQ9BU70 441 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 OXSMQ9NWU1 459 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 PADI4Q9UM07 663 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 MYH7BA7E2Y1 1941 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 A0A1W2PQ45 241 aaPredicted RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 A0A1W2PQY0 241 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 H3BMM5 538 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 PIP5K1BO14986 540 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 VPS4BO75351 444 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 SLC22A3O75751 556 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 NUP107P57740 925 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 ATP6V0D1P61421 351 aa12.37□□□□□ -0.43
RAD50-209ENST00000533482 CBX2Q14781 532 aaPredicted RBP12.37□□□□□ -0.43
RAD50-209ENST00000533482 GSTA3Q16772 222 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms