RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 DYRK4Q9NR20 520 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 BDP1A6H8Y1 2624 aa18.45■□□□□ 0.54
SMPD1-208ENST00000533123 MID1O15344 667 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 CLDN7O95471 211 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 XPAP23025 273 aaPredicted RBP18.44■□□□□ 0.54
SMPD1-208ENST00000533123 SERPINB8P50452 374 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 IRX4P78413 519 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 THOC5Q13769 683 aaKnown RBP18.44■□□□□ 0.54
SMPD1-208ENST00000533123 CDKN3Q16667 212 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 FAM46CQ5VWP2 391 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 C16orf46Q6P387 395 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 FBXL19Q6PCT2 694 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 TMPRSS6Q8IU80 811 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 VPS11Q9H270 941 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 HACD3Q9P035 362 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 B4GALT6Q9UBX8 382 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 MMP17Q9ULZ9 603 aa18.44■□□□□ 0.54
SMPD1-208ENST00000533123 OR51F1A6NGY5 319 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 C2orf81A6NN90 581 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 MAGEA12P43365 314 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 RPS14P62263 151 aaKnown RBP18.43■□□□□ 0.54
SMPD1-208ENST00000533123 NEPROQ6NW34 567 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 CRTC1Q6UUV9 634 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 TTC30BQ8N4P2 665 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 ISL2Q96A47 359 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 DNAJC1Q96KC8 554 aaKnown RBP18.43■□□□□ 0.54
SMPD1-208ENST00000533123 LYSMD1Q96S90 227 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 PITPNM3Q9BZ71 974 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 RHOJQ9H4E5 214 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 TBC1D17Q9HA65 648 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 ZFYVE1Q9HBF4 777 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 BPIFA1Q9NP55 256 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 NSMCE4AQ9NXX6 385 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 EMCNQ9ULC0 261 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 SLC39A10Q9ULF5 831 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 ATXN2Q99700 1313 aaKnown RBP18.43■□□□□ 0.54
SMPD1-208ENST00000533123 SNX3O60493 162 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 PAPSS2O95340 614 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-208ENST00000533123 SAT1P21673 171 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 BGNP21810 368 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 LHCGRP22888 699 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 LRRC32Q14392 662 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 CRY1Q16526 586 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 HSF5Q4G112 596 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-208ENST00000533123 LRRC66Q68CR7 880 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 ZNF776Q68DI1 518 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-208ENST00000533123 C2CD4AQ8NCU7 369 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-208ENST00000533123 OR4K2Q8NGD2 314 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 HDAC10Q969S8 669 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 SUDS3Q9H7L9 328 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-208ENST00000533123 ITM2BQ9Y287 266 aa18.43■□□□□ 0.54
SMPD1-208ENST00000533123 GOLGA8CPA6NN73 597 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 LPOP22079 712 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-208ENST00000533123 DRD3P35462 400 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 HMGCLP35914 325 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 IRF9Q00978 393 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 CNTN1Q12860 1018 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 GAS6Q14393 721 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 N4BP2L1Q5TBK1 243 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-208ENST00000533123 ERN2Q76MJ5 926 aaKnown RBP18.42■□□□□ 0.54
SMPD1-208ENST00000533123 NLRP9Q7RTR0 991 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 PTAR1Q7Z6K3 402 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-208ENST00000533123 SYNPOQ8N3V7 929 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 AADATQ8N5Z0 425 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 CCDC197Q8NCU1 140 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 THOC1Q96FV9 657 aaKnown RBP18.42■□□□□ 0.54
SMPD1-208ENST00000533123 NELL2Q99435 816 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 GPR22Q99680 433 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 FAM167BQ9BTA0 163 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 ZNF358Q9NW07 568 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 FBXO5Q9UKT4 447 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 ADRB3P13945 408 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 P2RY2P41231 377 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 ZNF140P52738 457 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-208ENST00000533123 LAMB3Q13751 1172 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 ZNF789Q5FWF6 425 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 FBXW10Q5XX13 1052 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 TRIM67Q6ZTA4 783 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 LDB1Q86U70 411 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-208ENST00000533123 PLD6Q8N2A8 252 aaKnown RBP18.42■□□□□ 0.54
SMPD1-208ENST00000533123 OR6P1Q8NGX9 317 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 STYXQ8WUJ0 223 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 TBATAQ96M53 351 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 MANSC1Q9H8J5 431 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 FBXO6Q9NRD1 293 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-208ENST00000533123 C2orf42Q9NWW7 574 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 SERGEFQ9UGK8 458 aa18.42■□□□□ 0.54
SMPD1-208ENST00000533123 FNDC3AQ9Y2H6 1198 aaKnown RBP18.42■□□□□ 0.54
SMPD1-208ENST00000533123 A0A096LPK6 155 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 GLRA3O75311 464 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 HAUS5O94927 633 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 ADH1BP00325 375 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 C5AR1P21730 350 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 ZXDAP98168 799 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 PTSQ03393 145 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 IFT88Q13099 833 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 SWT1Q5T5J6 900 aaKnown RBP18.41■□□□□ 0.54
SMPD1-208ENST00000533123 ARMC3Q5W041 872 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 SLC41A1Q8IVJ1 513 aa18.41■□□□□ 0.54
SMPD1-208ENST00000533123 OTUD6BQ8N6M0 293 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms