RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 EIF2S3P41091 472 aaKnown RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 TNNT3P45378 269 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 MARCKSL1P49006 195 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 COPS2P61201 443 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 BIRC2Q13490 618 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 COL28A1Q2UY09 1125 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 TBC1D25Q3MII6 688 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 CERCAMQ5T4B2 595 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 CCDC181Q5TID7 509 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 SLC30A9Q6PML9 568 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 RAD9BQ6WBX8 426 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 MARK2Q7KZI7 788 aaKnown RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 TRIM74Q86UV6 250 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 ZDHHC1Q8WTX9 485 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 PTCD2Q8WV60 388 aaKnown RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 KRT35Q92764 455 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 TADA1Q96BN2 335 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 HAUS1Q96CS2 278 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 SCARF2Q96GP6 870 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 ZNF578Q96N58 590 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 TRIB3Q96RU7 358 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 SRPK1Q96SB4 655 aaKnown RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 BAG1Q99933 345 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 GPR63Q9BZJ6 419 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 CDH19Q9H159 772 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 LRRN3Q9H3W5 708 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 APPL1Q9UKG1 709 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 RALYQ9UKM9 306 aaKnown RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 SATB2Q9UPW6 733 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 SHOC2Q9UQ13 582 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 PCDHA3Q9Y5H8 950 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 DUSP10Q9Y6W6 482 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 KIF26BQ2KJY2 2108 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 ZFHX4Q86UP3 3567 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 BTNL10A8MVZ5 291 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 HACD1B0YJ81 288 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 TMX2-CTNND1H3BSU7 103 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 CASC3O15234 703 aaKnown RBP17.12■□□□□ 0.33
PHRF1-204ENST00000532550 NUDT21O43809 227 aaKnown RBP17.12■□□□□ 0.33
PHRF1-204ENST00000532550 RBMS1P29558 406 aaKnown RBP17.12■□□□□ 0.33
PHRF1-204ENST00000532550 CTNNA1P35221 906 aaKnown RBP17.12■□□□□ 0.33
PHRF1-204ENST00000532550 CETN2P41208 172 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 HLTFQ14527 1009 aaKnown RBP eCLIP17.12■□□□□ 0.33
PHRF1-204ENST00000532550 PPP2R5EQ16537 467 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 PYCR3Q53H96 274 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 C3orf38Q5JPI3 329 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 BBS12Q6ZW61 710 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 PID1Q7Z2X4 250 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 LYSMD3Q7Z3D4 306 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 KIAA1328Q86T90 577 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 GALNT13Q8IUC8 556 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 CCNJLQ8IV13 435 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 SFTPA2Q8IWL1 248 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 SNIP1Q8TAD8 396 aaKnown RBP17.12■□□□□ 0.33
PHRF1-204ENST00000532550 HTR3CQ8WXA8 447 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 COX14Q96I36 57 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 OR2M4Q96R27 311 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 WDR24Q96S15 920 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 VAT1Q99536 393 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 RAD18Q9NS91 495 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 UBP1Q9NZI7 540 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 KLHL8Q9P2G9 620 aaPredicted RBP17.12■□□□□ 0.33
PHRF1-204ENST00000532550 FAM153AQ9UHL3 310 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 ZNHIT2Q9UHR6 403 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 RNF215Q9Y6U7 377 aa17.12■□□□□ 0.33
PHRF1-204ENST00000532550 A0A1W2PQM1 296 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 CCDC66A2RUB6 948 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 RHPN2P1A8MT19 583 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 APOC4-APOC2K7ER74 178 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 ZW10O43264 779 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 DXOO77932 396 aaKnown RBP17.11■□□□□ 0.33
PHRF1-204ENST00000532550 NDST3O95803 873 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 APOC2P02655 101 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 ATP1A1P05023 1023 aaKnown RBP17.11■□□□□ 0.33
PHRF1-204ENST00000532550 PIRTP0C851 137 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 CD68P34810 354 aaPredicted RBP17.11■□□□□ 0.33
PHRF1-204ENST00000532550 ACTR1BP42025 376 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 ABCG1P45844 678 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 VAV2P52735 878 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 ACTR1AP61163 376 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 WASHC5Q12768 1159 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 XRCC4Q13426 336 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 HENMT1Q5T8I9 393 aaKnown RBP17.11■□□□□ 0.33
PHRF1-204ENST00000532550 FOXR1Q6PIV2 292 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 TMC3Q7Z5M5 1100 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 TXLNBQ8N3L3 684 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 ACRBPQ8NEB7 543 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 WDR36Q8NI36 951 aaKnown RBP17.11■□□□□ 0.33
PHRF1-204ENST00000532550 FERMT1Q9BQL6 677 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 STRADBQ9C0K7 418 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 LACRTQ9GZZ8 138 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 VPS18Q9P253 973 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 IMPACTQ9P2X3 320 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 CNOT6Q9ULM6 557 aaKnown RBP17.11■□□□□ 0.33
PHRF1-204ENST00000532550 REXO2Q9Y3B8 237 aaKnown RBP17.11■□□□□ 0.33
PHRF1-204ENST00000532550 PLEKHM1Q9Y4G2 1056 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 ZFYVE26Q68DK2 2539 aa17.11■□□□□ 0.33
PHRF1-204ENST00000532550 CCDC187A0A096LP49 1063 aa17.1■□□□□ 0.33
PHRF1-204ENST00000532550 H7C0C1 242 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms