RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 EFCAB10A6NFE3 127 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 A8MV72 311 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 CAPN14A8MX76 684 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 F5H423 210 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 NR5A2O00482 541 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 GNL1P36915 607 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 CLCNKBP51801 687 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC7A2P52569 658 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 GPX6P59796 221 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 CDC42EP1Q00587 391 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 RHDQ02161 417 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 USP10Q14694 798 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 LHX8Q68G74 356 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ERAP2Q6P179 960 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 PLET1Q6UQ28 207 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 OTOP3Q7RTS5 596 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 C10orf107Q8IVU9 208 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 MSANTD3Q96H12 275 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 SNX18Q96RF0 628 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 TTYH2Q9BSA4 534 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 SIK2Q9H0K1 926 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 RIC8BQ9NVN3 520 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 SMPD4Q9NXE4 827 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ACTR3BQ9P1U1 418 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 GPSM3Q9Y4H4 160 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 LRRC37AA6NMS7 1700 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 QSER1Q2KHR3 1735 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 AMHP03971 560 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 IRF1P10914 325 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 MYOGP15173 224 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 M6PRP20645 277 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 RPS3AP61247 264 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 GTF2BQ00403 316 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 PFKPQ01813 784 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 CCDC142Q17RM4 750 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 TBRG1Q3YBR2 411 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 FAM98BQ52LJ0 330 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 NOMO2Q5JPE7 1267 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 FBXO47Q5MNV8 452 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF517Q6ZMY9 492 aaPredicted RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 CHST15Q7LFX5 561 aaPredicted RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 STX12Q86Y82 276 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 OR8H3Q8N146 312 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 THEM5Q8N1Q8 247 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 PHTF2Q8N3S3 785 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 AKAP1Q92667 903 aaKnown RBP eCLIP6.77□□□□□ -1.338e-6■■■■□ 20.4
TGFBR3-209ENST00000532540 ASB9Q96DX5 294 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 VPS39Q96JC1 886 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 VCPIP1Q96JH7 1222 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 PRRG3Q9BZD7 231 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 POLR3BQ9NW08 1133 aaPredicted RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 MAT2BQ9NZL9 334 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 UBQLN1Q9UMX0 589 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 PDE10AQ9Y233 779 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 COPG1Q9Y678 874 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 MCM3APO60318 1980 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 SMIM28A0A1B0GU29 152 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 CLDN5O00501 218 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 MTA2O94776 668 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 POLBP06746 335 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 ABCB1P08183 1280 aaPredicted RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 SNRPB2P08579 225 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 POLR2CP19387 275 aaPredicted RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 MSH3P20585 1137 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 HNF4AP41235 474 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 TAF6P49848 677 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 HK2P52789 917 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 PPP5CP53041 499 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 DEFB103AP81534 67 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 MPP1Q00013 466 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 CLCQ05315 142 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 FPGSQ05932 587 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 DPYSL3Q14195 570 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 FUT11Q495W5 492 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 MARCH8Q5T0T0 291 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 TRIQKQ629K1 86 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC24A5Q71RS6 500 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 TRIM69Q86WT6 500 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 MIB1Q86YT6 1006 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 LSMEM1Q8N8F7 131 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 DCAKDQ8WVC6 231 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 ACDQ96AP0 544 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 RBM38Q9H0Z9 239 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 PCDHAC1Q9H158 963 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 CXCL16Q9H2A7 254 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 KCNK13Q9HB14 408 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 SAGE1Q9NXZ1 904 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 CPSF3Q9UKF6 684 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 POLHQ9Y253 713 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 MRPS7Q9Y2R9 242 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 RAP2CQ9Y3L5 183 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 PCDHGA11Q9Y5H2 935 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 URB1O60287 2271 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 GOLGA4Q13439 2230 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 TRIM64A6NGJ6 449 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 TRIM64BA6NI03 449 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF99A8MXY4 864 aaPredicted RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 RNF103O00237 685 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 RFXAPO00287 272 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms