RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 COX7A2P14406 83 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 AMPHP49418 695 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 CSNK2A1P68400 391 aaPredicted RBP3.13□□□□□ -1.91
ATM-217ENST00000531957 NEXNQ0ZGT2 675 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 ALG11Q2TAA5 492 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 NAA35Q5VZE5 725 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 ARHGAP17Q68EM7 881 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 OR7E24Q6IFN5 339 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 CEACAM20Q6UY09 585 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 PQLC2Q6ZP29 291 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 BEST3Q8N1M1 668 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 ZNF485Q8NCK3 441 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 CSNK2A3Q8NEV1 391 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 OR10V1Q8NGI7 309 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 OR5R1Q8NH85 324 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 ZCCHC10Q8TBK6 192 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 KLHL29Q96CT2 875 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 LINGO1Q96FE5 620 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 APOPT1Q96IL0 206 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 UBXN10Q96LJ8 280 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 SH3GL2Q99962 352 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 FUZQ9BT04 418 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 UPF2Q9HAU5 1272 aaKnown RBP3.13□□□□□ -1.91
ATM-217ENST00000531957 TBX20Q9UMR3 447 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 CEPT1Q9Y6K0 416 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 PTPRCP08575 1304 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 ZNHIT1O43257 154 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 POLR2CP19387 275 aaPredicted RBP3.12□□□□□ -1.91
ATM-217ENST00000531957 CTCFP49711 727 aaPredicted RBP3.12□□□□□ -1.91
ATM-217ENST00000531957 TAS2R38P59533 333 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 FOXM1Q08050 763 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 CAMK1Q14012 370 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 ZRSR2Q15696 482 aaKnown RBP3.12□□□□□ -1.91
ATM-217ENST00000531957 TMEM30BQ3MIR4 351 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 ZNF876PQ49A33 203 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 TTI2Q6NXR4 508 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 BRAT1Q6PJG6 821 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 OR52I2Q8NH67 350 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 HVCN1Q96D96 273 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 ST6GAL2Q96JF0 529 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 QRFPRQ96P65 431 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 IFIH1Q9BYX4 1025 aaKnown RBP3.12□□□□□ -1.91
ATM-217ENST00000531957 MAP3K20Q9NYL2 800 aaKnown RBP3.12□□□□□ -1.91
ATM-217ENST00000531957 GGA3Q9NZ52 723 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 ACSL5Q9ULC5 683 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 KLHL20Q9Y2M5 609 aa3.12□□□□□ -1.91
ATM-217ENST00000531957 AAR2Q9Y312 384 aaKnown RBP3.12□□□□□ -1.91
ATM-217ENST00000531957 RRN3P2A6NIE6 340 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 LRRC53A6NM62 1247 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 TAF4O00268 1085 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 TUBBP07437 444 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 PAX1P15863 534 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 XBP1P17861 261 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 DCTP40126 519 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 GABRB2P47870 512 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 HOXA1P49639 335 aaPredicted RBP3.11□□□□□ -1.91
ATM-217ENST00000531957 TUBB4BP68371 445 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 COG7P83436 770 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 RPL24P83731 157 aaKnown RBP3.11□□□□□ -1.91
ATM-217ENST00000531957 TLE2Q04725 743 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 RUNX1T1Q06455 604 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 FGFBP1Q14512 234 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 TMEM35AQ53FP2 167 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 FAM69AQ5T7M9 428 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 SLC35E4Q6ICL7 350 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 SLC46A3Q7Z3Q1 461 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 CPXCR1Q8N123 301 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 CNBD1Q8NA66 436 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 DBF4BQ8NFT6 615 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 CADM4Q8NFZ8 388 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 SLC44A1Q8WWI5 657 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 EIF2AK1Q9BQI3 630 aaKnown RBP3.11□□□□□ -1.91
ATM-217ENST00000531957 FSD1Q9BTV5 496 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 MOV10L1Q9BXT6 1211 aaKnown RBP3.11□□□□□ -1.91
ATM-217ENST00000531957 BARHL1Q9BZE3 327 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 TFB2MQ9H5Q4 396 aaKnown RBP3.11□□□□□ -1.91
ATM-217ENST00000531957 FKRPQ9H9S5 495 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 SLC6A13Q9NSD5 602 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 ACSS1Q9NUB1 689 aaPredicted RBP3.11□□□□□ -1.91
ATM-217ENST00000531957 FAM118AQ9NWS6 357 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 PPP1R14DQ9NXH3 145 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 MPP6Q9NZW5 540 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 ARHGAP26Q9UNA1 814 aa3.11□□□□□ -1.91
ATM-217ENST00000531957 IGKV3D-15A0A087WSY6 115 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 CCDC196A0A1B0GTZ2 297 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 CTAGE9A4FU28 777 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 USP17L23D6RBM5 183 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 SPINT2O43291 252 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 CIDEAO60543 219 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 IGHV4-39P01824 125 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 CTAGE8P0CG41 777 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 FAM106CPP0CH98 169 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 IL7RP16871 459 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 TERF1P54274 439 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 CLDN20P56880 219 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 VAMP2P63027 116 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 EEF1A1P68104 462 aaKnown RBP3.1□□□□□ -1.91
ATM-217ENST00000531957 DRAP1Q14919 205 aaPredicted RBP3.1□□□□□ -1.91
ATM-217ENST00000531957 EEF1A1P5Q5VTE0 462 aa3.1□□□□□ -1.91
ATM-217ENST00000531957 FRG2Q64ET8 278 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms