RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SPG21Q9NZD8 308 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 CGNQ9P2M7 1197 aaKnown RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 NLKQ9UBE8 527 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 HEY2Q9UBP5 337 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 HACL1Q9UJ83 578 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 LAMP5Q9UJQ1 280 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 CCNL1Q9UK58 526 aaPredicted RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 EXOC7Q9UPT5 735 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 CLCA3PQ9Y6N3 262 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 CARMIL2Q6F5E8 1435 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 WIPF3A6NGB9 483 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 TMEM110-MUSTN1A8MSY1 372 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM157AC9JC47 383 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 CYP27B1O15528 508 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 SUV39H1O43463 412 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 PRAMEF11O60813 436 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 RPS6KA4O75676 772 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 AKAP3O75969 853 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 MOCS3O95396 460 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 SLC16A8O95907 504 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 BCL10O95999 233 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 GH2P01242 217 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 RLN1P04808 185 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 CCDC159P0C7I6 412 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 IL7RP16871 459 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 VCLP18206 1134 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 ITGAXP20702 1163 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 NR2F2P24468 414 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 CTGFP29279 349 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 TIA1P31483 386 aaKnown RBP eCLIP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 APOBEC3AP31941 199 aaPredicted RBP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 FASLGP48023 281 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 HNMTP50135 292 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 CLCN3P51790 818 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 ACSM1Q08AH1 577 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 HSPB3Q12988 150 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 GAB1Q13480 694 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 SGCBQ16585 318 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 TAZQ16635 292 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 ME3Q16798 604 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 ZXDCQ2QGD7 858 aaPredicted RBP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 VWC2Q2TAL6 325 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 CCDC40Q4G0X9 1142 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 CDONQ4KMG0 1287 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 PDCD4Q53EL6 469 aaKnown RBP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 C10orf76Q5T2E6 689 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 C6orf163Q5TEZ5 329 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 C1QL3Q5VWW1 255 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 NCAPH2Q6IBW4 605 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 IRGCQ6NXR0 463 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 MFSD7Q6UXD7 560 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 NHLRC1Q6VVB1 395 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 TRIM72Q6ZMU5 477 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 MEX3BQ6ZN04 569 aaKnown RBP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 C15orf52Q6ZUT6 534 aaKnown RBP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 GDF7Q7Z4P5 450 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 PHLDB2Q86SQ0 1253 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 TMC8Q8IU68 726 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 CCDC13Q8IYE1 715 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 ZCCHC9Q8N567 271 aaKnown RBP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 BHLHE22Q8NFJ8 381 aaPredicted RBP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 DBF4BQ8NFT6 615 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 ABHD11Q8NFV4 315 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 OR52N4Q8NGI2 321 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 FAR1Q8WVX9 515 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 SLC5A11Q8WWX8 675 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 CTNNBL1Q8WYA6 563 aaPredicted RBP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM168AQ92567 244 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 SPSB1Q96BD6 273 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 RRNAD1Q96FB5 475 aaKnown RBP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 KAZALD1Q96I82 304 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 SLC41A2Q96JW4 573 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 CFAP53Q96M91 514 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 LMF1Q96S06 567 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 SMC6Q96SB8 1091 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 SIN3AQ96ST3 1273 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 MNTQ99583 582 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM110AQ9BQ89 295 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 NSUN3Q9H649 340 aaKnown RBP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 BPIFA1Q9NP55 256 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 KLC4Q9NSK0 619 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM53CQ9NYF3 392 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 STK26Q9P289 416 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 LARSQ9P2J5 1176 aaKnown RBP4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 SLC24A2Q9UI40 661 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 FBXL5Q9UKA1 691 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 TNFSF13BQ9Y275 285 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 WDR37Q9Y2I8 494 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 IRAK3Q9Y616 596 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 SLC30A1Q9Y6M5 507 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 MST1RQ04912 1400 aa4.34□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM205AQ6ZU69 1335 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 EMSYQ7Z589 1322 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 CAPN14A8MX76 684 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 KPNA7A9QM74 516 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 GPR89AB7ZAQ6 455 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 UBXN8O00124 270 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 AP4M1O00189 453 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 RIPK2O43353 540 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 SLC25A17O43808 307 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms