RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 ADCY8P40145 1251 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 ATP5OP48047 213 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 INHBCP55103 352 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 CCL7P80098 99 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 KIF5AQ12840 1032 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 XRCC4Q13426 336 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 GALNT3Q14435 633 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 PRKD1Q15139 912 aaPredicted RBP12.5□□□□□ -0.41
C11orf54-210ENST00000531516 CLPPQ16740 277 aaPredicted RBP12.5□□□□□ -0.41
C11orf54-210ENST00000531516 COL28A1Q2UY09 1125 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 MAP9Q49MG5 647 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 ZNF569Q5MCW4 686 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 PDPK2PQ6A1A2 396 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 ITPRIPL1Q6GPH6 555 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 MARK2Q7KZI7 788 aaKnown RBP12.5□□□□□ -0.41
C11orf54-210ENST00000531516 PID1Q7Z2X4 250 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 KDELC2Q7Z4H8 507 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 PIM3Q86V86 326 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 ZC3H18Q86VM9 953 aaKnown RBP12.5□□□□□ -0.41
C11orf54-210ENST00000531516 FBXO39Q8N4B4 442 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 CNTD1Q8N815 330 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 TEKT5Q96M29 485 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 PPP1R2P1Q96PQ5 205 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 BAG1Q99933 345 aaPredicted RBP12.5□□□□□ -0.41
C11orf54-210ENST00000531516 ZSCAN5AQ9BUG6 496 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 SPATA16Q9BXB7 569 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 FSD1LQ9BXM9 530 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 CEP41Q9BYV8 373 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 RBSNQ9H1K0 784 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 TRABDQ9H4I3 376 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.5□□□□□ -0.41
C11orf54-210ENST00000531516 HACD3Q9P035 362 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 SATB2Q9UPW6 733 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 TMEM98Q9Y2Y6 226 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 ENTPD2Q9Y5L3 495 aa12.5□□□□□ -0.41
C11orf54-210ENST00000531516 TP53BP1Q12888 1972 aaPredicted RBP12.49□□□□□ -0.41
C11orf54-210ENST00000531516 SOWAHDA6NJG2 315 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 D6RAR5 112 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 NTN3O00634 580 aaPredicted RBP12.49□□□□□ -0.41
C11orf54-210ENST00000531516 PMPCBO75439 489 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 TJP3O95049 919 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 EPOP01588 193 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 MMP2P08253 660 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 PTPN3P26045 913 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 ALDH4A1P30038 563 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 GPR3P46089 330 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 POLD2P49005 469 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 RWDD2BP57060 319 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 DCDC1P59894 354 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 CTBSQ01459 385 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 CCDC173Q0VFZ6 552 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 GTF2H3Q13889 308 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 HLTFQ14527 1009 aaKnown RBP eCLIP12.49□□□□□ -0.41
C11orf54-210ENST00000531516 PRPSAP1Q14558 356 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 TAZQ16635 292 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 IGF2-ASQ6U949 168 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 RAB11FIP2Q7L804 512 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 LYSMD3Q7Z3D4 306 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 PDZD3Q86UT5 571 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 PHYKPLQ8IUZ5 450 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 CDKL3Q8IVW4 592 aaPredicted RBP12.49□□□□□ -0.41
C11orf54-210ENST00000531516 UBL4BQ8N7F7 174 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 KCNE4Q8WWG9 221 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 HTR3CQ8WXA8 447 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 SH3KBP1Q96B97 665 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 LIN37Q96GY3 246 aaPredicted RBP12.49□□□□□ -0.41
C11orf54-210ENST00000531516 AHCYL2Q96HN2 611 aaKnown RBP12.49□□□□□ -0.41
C11orf54-210ENST00000531516 TTC25Q96NG3 672 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 CMKLR1Q99788 373 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 DPYSL5Q9BPU6 564 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 DPH1Q9BZG8 443 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 IMPACTQ9P2X3 320 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 EFR3BQ9Y2G0 817 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 RNF215Q9Y6U7 377 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 FREM2Q5SZK8 3169 aa12.49□□□□□ -0.41
C11orf54-210ENST00000531516 GOLGA4Q13439 2230 aaKnown RBP12.48□□□□□ -0.41
C11orf54-210ENST00000531516 hCG_1818297A0A087WSY0 165 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 BTNL10A8MVZ5 291 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 APOC4-APOC2K7ER74 178 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 PLD2O14939 933 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 NOBOXO60393 691 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 ANXA9O76027 345 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 TNFSF15O95150 251 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 SLC25A14O95258 325 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-210ENST00000531516 ECEL1O95672 775 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 CPNE6O95741 557 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 APOC2P02655 101 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 FGF1P05230 155 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 ITGA2BP08514 1039 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 VCLP18206 1134 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 AK4P27144 223 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-210ENST00000531516 CCKBRP32239 447 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 VAV2P52735 878 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 MPP3Q13368 585 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 PTPRRQ15256 657 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 LLGL1Q15334 1064 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 AMZ1Q400G9 498 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 PYCR3Q53H96 274 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 HENMT1Q5T8I9 393 aaKnown RBP12.48□□□□□ -0.41
C11orf54-210ENST00000531516 TMEM164Q5U3C3 297 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms