RNA–Protein interactions for RNA: ENST00000531206.5

CDC27-207, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-207ENST00000531206 GJB2P29033 226 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 HOXA13P31271 388 aaPredicted RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 PIGAP37287 484 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 USP8P40818 1118 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 ETV3P41162 512 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 PIP4K2AP48426 406 aaPredicted RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 ZNF41P51814 821 aaPredicted RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 RPL15P61313 204 aaKnown RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 SLC25A3Q00325 362 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 ITGB3BPQ13352 177 aaPredicted RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 GRAPQ13588 217 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 ARHGEF7Q14155 803 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 EPHA7Q15375 998 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 C6orf183Q5T699 404 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 HSDL2Q6YN16 418 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 ANKRD33Q7Z3H0 272 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 ARHGAP22Q7Z5H3 698 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 SGMS1Q86VZ5 419 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 DNAAF5Q86Y56 855 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 ZNF808Q8N4W9 903 aaPredicted RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 ZMIZ2Q8NF64 920 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 TNIP2Q8NFZ5 429 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 GRAPLQ8TC17 118 aaPredicted RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 PSPC1Q8WXF1 523 aaKnown RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 RND1Q92730 232 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 SYN2Q92777 582 aaPredicted RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 ATP6V0A1Q93050 837 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 ACDQ96AP0 544 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 OPTNQ96CV9 577 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 RAX2Q96IS3 184 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 MSLNLQ96KJ4 702 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 CXorf58Q96LI9 332 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 LLPHQ9BRT6 129 aaKnown RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 ZSCAN5AQ9BUG6 496 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 DPCDQ9BVM2 203 aaPredicted RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 FNDC11Q9BVV2 318 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 AAMDCQ9H7C9 122 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 METTL7AQ9H8H3 244 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 MINDY3Q9H8M7 445 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 CALHM2Q9HA72 323 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 WDR6Q9NNW5 1121 aaKnown RBP3.17□□□□□ -1.9
CDC27-207ENST00000531206 CD93Q9NPY3 652 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 NECTIN3Q9NQS3 549 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 RXFP3Q9NSD7 469 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 DTX4Q9Y2E6 619 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 CAPN6Q9Y6Q1 641 aa3.17□□□□□ -1.9
CDC27-207ENST00000531206 GRIN2DO15399 1336 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 CCL15-CCL14A0A0B4J2E2 113 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 A0A1W2PR77 199 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 TRBC2A0A5B9 178 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 INO80B-WBP1J3KQ70 363 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 SGK1O00141 431 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 WWP2O00308 870 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 PALMO75781 387 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 OPN1MWP04001 364 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 ALDOCP09972 364 aaKnown RBP3.16□□□□□ -1.9
CDC27-207ENST00000531206 OPN1MW2P0DN77 364 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 OPN1MW3P0DN78 364 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 EPXP11678 715 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 EEF2P13639 858 aaKnown RBP3.16□□□□□ -1.9
CDC27-207ENST00000531206 CKMT2P17540 419 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 SAT1P21673 171 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 AHCYP23526 432 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 ADRA1DP25100 572 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 AGTR2P50052 363 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 CHN2P52757 468 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 OLR1P78380 273 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 CAPSQ13938 189 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 PCLAFQ15004 111 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 LARS2Q15031 903 aaKnown RBP3.16□□□□□ -1.9
CDC27-207ENST00000531206 CCL15Q16663 113 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 AASDHQ4L235 1098 aaPredicted RBP3.16□□□□□ -1.9
CDC27-207ENST00000531206 RAB41Q5JT25 222 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 RARS2Q5T160 578 aaKnown RBP3.16□□□□□ -1.9
CDC27-207ENST00000531206 E4F1Q66K89 784 aaPredicted RBP3.16□□□□□ -1.9
CDC27-207ENST00000531206 KRT39Q6A163 491 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 RCSD1Q6JBY9 416 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 MIS18BP1Q6P0N0 1132 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 KIAA1328Q86T90 577 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 ARMC10Q8N2F6 343 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 GBP7Q8N8V2 638 aaPredicted RBP3.16□□□□□ -1.9
CDC27-207ENST00000531206 WDR20Q8TBZ3 569 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 RAPGEF5Q92565 580 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 CORO2AQ92828 525 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 ERGIC1Q969X5 290 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 TMCO6Q96DC7 493 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 PCYT2Q99447 389 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 SIKE1Q9BRV8 207 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 ROGDIQ9GZN7 287 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 RAB33BQ9H082 229 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 C2orf40Q9H1Z8 148 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 MUC13Q9H3R2 512 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 TRPC7Q9HCX4 862 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 RANGRFQ9HD47 186 aaPredicted RBP3.16□□□□□ -1.9
CDC27-207ENST00000531206 SERHLQ9NQF3 203 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 C6orf203Q9P0P8 240 aaPredicted RBP3.16□□□□□ -1.9
CDC27-207ENST00000531206 USP36Q9P275 1121 aaKnown RBP3.16□□□□□ -1.9
CDC27-207ENST00000531206 FBXW11Q9UKB1 542 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 B3GNT3Q9Y2A9 372 aa3.16□□□□□ -1.9
CDC27-207ENST00000531206 ZDHHC9Q9Y397 364 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms