RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 ALPK1Q96QP1 1244 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 LGMNQ99538 433 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 CDC6Q99741 560 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 DHRS4Q9BTZ2 278 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 HEMGNQ9BXL5 484 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 OSBPL1AQ9BXW6 950 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 HDAC8Q9BY41 377 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PCED1AQ9H1Q7 454 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 HOMER3Q9NSC5 361 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 SAE1Q9UBE0 346 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PACSIN2Q9UNF0 486 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 TTLL3Q9Y4R7 772 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PCDHGB3Q9Y5G1 929 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PCDHGA5Q9Y5G8 931 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 CACNA1HO95180 2353 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 BCLAF3A2AJT9 711 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 EME2A4GXA9 379 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 GOLGA6L10A6NI86 522 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 C16orf96A6NNT2 1141 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 H0YC42 278 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 PDLIM1O00151 329 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 RTCAO00442 366 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 PLK4O00444 970 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 INSIG1O15503 277 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC7A4O43246 635 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 WIPF1O43516 503 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 PLRG1O43660 514 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 SUSD5O60279 629 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 SNX2O60749 519 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 EPN2O95208 641 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 SEMA4FO95754 770 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 VIMP08670 466 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 CCNB1P14635 433 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 TGM1P22735 817 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 ITGB7P26010 798 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 HSPA9P38646 679 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 CETN2P41208 172 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 MMP13P45452 471 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 RGRP47804 291 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 DHPSP49366 369 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 SCNN1BP51168 640 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 TAS2R38P59533 333 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 DYNLT1P63172 113 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 MRPS35P82673 323 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 SP140Q13342 867 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 LAPTM5Q13571 262 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 POM121L1PQ3SYA9 428 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 ZNF805Q5CZA5 627 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 RALGPS1Q5JS13 557 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 PLA2G2CQ5R387 149 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 PIP5KL1Q5T9C9 394 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 AGBL4Q5VU57 503 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 HIBCHQ6NVY1 386 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 AADACL2Q6P093 401 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 NEK5Q6P3R8 708 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 NCEH1Q6PIU2 408 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 BBS12Q6ZW61 710 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 ERN2Q76MJ5 926 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 CCDC13Q8IYE1 715 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 BBS5Q8N3I7 341 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 ESX1Q8N693 406 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 TMCO5AQ8N6Q1 288 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 TRIML2Q8N7C3 387 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 GALNT6Q8NCL4 622 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 TRIM58Q8NG06 486 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 OR2T34Q8NGX1 318 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 OR14C36Q8NHC7 312 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 GRIN3AQ8TCU5 1115 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 SGCDQ92629 289 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 P3H4Q92791 437 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 BIRC7Q96CA5 298 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 PPP1R16AQ96I34 528 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 NSMCE3Q96MG7 304 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 ZNF641Q96N77 438 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 KLHL32Q96NJ5 620 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 RBM14Q96PK6 669 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 NUDCD1Q96RS6 583 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 TUBGCP5Q96RT8 1024 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 IL12RB2Q99665 862 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 TM9SF2Q99805 663 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 MGME1Q9BQP7 344 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 UQCC2Q9BRT2 126 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 CINPQ9BW66 212 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 OSBPL8Q9BZF1 889 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 ARRDC1-AS1Q9H2J1 176 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 MRPL46Q9H2W6 279 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 C6orf106Q9H6K1 298 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 ZDHHC6Q9H6R6 413 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 LIN7BQ9HAP6 207 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 DYRK4Q9NR20 520 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 TMEM74BQ9NUR3 256 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 RBM22Q9NW64 420 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 AMACRQ9UHK6 382 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 GMEB2Q9UKD1 530 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 PILRBQ9UKJ0 227 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 CARD8Q9Y2G2 431 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 EML5Q05BV3 1969 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 MUC6Q6W4X9 2439 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 ABCA7Q8IZY2 2146 aa6.3□□□□□ -1.4
ATPAF1-209ENST00000529214 FRYLO94915 3013 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms