RNA–Protein interactions for RNA: ENST00000528653.1

EIF3F-202, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-202ENST00000528653 TSHRP16473 764 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 MC4RP32245 332 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 MPLP40238 635 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 HADHAP40939 763 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 CARSP49589 748 aaKnown RBP13.6□□□□□ -0.23
EIF3F-202ENST00000528653 DPTQ07507 201 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 PDIA2Q13087 525 aaKnown RBP13.6□□□□□ -0.23
EIF3F-202ENST00000528653 CUL1Q13616 776 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 INPP5AQ14642 412 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 FASTKD3Q14CZ7 662 aaKnown RBP13.6□□□□□ -0.23
EIF3F-202ENST00000528653 SMAD1Q15797 465 aaKnown RBP13.6□□□□□ -0.23
EIF3F-202ENST00000528653 CHRNA6Q15825 494 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 SKIDA1Q1XH10 827 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 HP1BP3Q5SSJ5 553 aaPredicted RBP13.6□□□□□ -0.23
EIF3F-202ENST00000528653 PEAR1Q5VY43 1037 aaPredicted RBP13.6□□□□□ -0.23
EIF3F-202ENST00000528653 PNCKQ6P2M8 343 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 CENPUQ71F23 418 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 NLRP9Q7RTR0 991 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 ABI3BPQ7Z7G0 1075 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 CCDC25Q86WR0 208 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 HEATR4Q86WZ0 1026 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 ANKMY2Q8IV38 441 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 IFT20Q8IY31 132 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 BMFQ96LC9 184 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 TBATAQ96M53 351 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 ARRDC1-AS1Q9H2J1 176 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 SEMA4AQ9H3S1 761 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 SUDS3Q9H7L9 328 aaPredicted RBP13.6□□□□□ -0.23
EIF3F-202ENST00000528653 SAYSD1Q9NPB0 183 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 TREX1Q9NSU2 369 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 RIMKLBQ9ULI2 386 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 OR1A2Q9Y585 309 aa13.6□□□□□ -0.23
EIF3F-202ENST00000528653 PLXNB3Q9ULL4 1909 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 FAM237BA0A1B0GVD1 139 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 CCDC162PA2VCL2 907 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 OR51F1A6NGY5 319 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 E7ESA3 106 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 INPP4BO15327 924 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 CFIP05156 583 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 THEGLP0DJG4 465 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 PGAM1P18669 254 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 ITGALP20701 1170 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 PSMA3P25788 255 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 CD38P28907 300 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 ECHS1P30084 290 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 HOXD12P35452 270 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 ELK3P41970 407 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 DPP6P42658 865 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 AFF3P51826 1226 aaKnown RBP13.59□□□□□ -0.23
EIF3F-202ENST00000528653 PFN3P60673 137 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 PRAMEP78395 509 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 XIAPP98170 497 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 ACVR1Q04771 509 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 PEX6Q13608 980 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 CCDC6Q16204 474 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 ANKRD20A4Q4UJ75 823 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 ATP13A5Q4VNC0 1218 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 TPRG1LQ5T0D9 272 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 ARMC3Q5W041 872 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 AFTPHQ6ULP2 937 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 ADAMTSL4Q6UY14 1074 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 TRIM74Q86UV6 250 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 IGDCC3Q8IVU1 814 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 TRAM1L1Q8N609 369 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 PEX13Q92968 403 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 HDAC10Q969S8 669 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 MFSD3Q96ES6 412 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 CFAP36Q96G28 342 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 CDKN2AIPNLQ96HQ2 116 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 EBNA1BP2Q99848 306 aaKnown RBP13.59□□□□□ -0.23
EIF3F-202ENST00000528653 ZSCAN5AQ9BUG6 496 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 FAM129AQ9BZQ8 928 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 SMOC1Q9H4F8 434 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 ANKZF1Q9H8Y5 726 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 MTRF1LQ9UGC7 380 aaKnown RBP13.59□□□□□ -0.23
EIF3F-202ENST00000528653 GMEB2Q9UKD1 530 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 PCDHGA5Q9Y5G8 931 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 HS3ST3A1Q9Y663 406 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 RPS6KL1Q9Y6S9 549 aa13.59□□□□□ -0.23
EIF3F-202ENST00000528653 WDR87Q6ZQQ6 2873 aa13.58□□□□□ -0.23
EIF3F-202ENST00000528653 RALGAPA1Q6GYQ0 2036 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 A0A1B0GVT2 93 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 PRR5-ARHGAP8B1AHC4 643 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 PATE3B3GLJ2 98 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 H7C0S8 307 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 EIF3HO15372 352 aaKnown RBP eCLIP13.58□□□□□ -0.24
EIF3F-202ENST00000528653 UGT1A9O60656 530 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 SRP72O76094 671 aaKnown RBP13.58□□□□□ -0.24
EIF3F-202ENST00000528653 GOT2P00505 430 aaKnown RBP13.58□□□□□ -0.24
EIF3F-202ENST00000528653 PYGLP06737 847 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 RETP07949 1114 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 PRSS56P0CW18 603 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 UGT1A6P19224 532 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 UGT1A1P22309 533 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 UGT1A4P22310 534 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 TEAD1P28347 426 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 UGT1A3P35503 534 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 UGT1A5P35504 534 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 RABIFP47224 123 aa13.58□□□□□ -0.24
EIF3F-202ENST00000528653 CSNK1EP49674 416 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms