RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TOP3BO95985 862 aaKnown RBP13.31□□□□□ -0.28
CAPN1-215ENST00000528396 AGTP01019 485 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 IFNB1P01574 187 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 CKMT1AP12532 417 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 ACP1P24666 158 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 CHRNA4P43681 627 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 PEX6Q13608 980 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 C6orf132Q5T0Z8 1188 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 LVRNQ6Q4G3 990 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 MARK2Q7KZI7 788 aaKnown RBP13.31□□□□□ -0.28
CAPN1-215ENST00000528396 TRIM74Q86UV6 250 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 GALNT13Q8IUC8 556 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 CCDC89Q8N998 374 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 FAM181AQ8N9Y4 354 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 FAM46DQ8NEK8 389 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 C1orf54Q8WWF1 131 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 TMEM121Q9BTD3 319 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 GSDMCQ9BYG8 508 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 CLPBQ9H078 707 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 SIRPGQ9P1W8 387 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 KLK13Q9UKR3 277 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 TMEM98Q9Y2Y6 226 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 PKP3Q9Y446 797 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 GPSM3Q9Y4H4 160 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 NEUROG3Q9Y4Z2 214 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 SPO11Q9Y5K1 396 aa13.31□□□□□ -0.28
CAPN1-215ENST00000528396 C2orf81A6NN90 581 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 LIASO43766 372 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 FGGP02679 453 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 CEACAM5P06731 702 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 CELA2BP08218 269 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-215ENST00000528396 STIP1P31948 543 aaKnown RBP13.3□□□□□ -0.28
CAPN1-215ENST00000528396 POLD2P49005 469 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 LMAN1P49257 510 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 DCDC1P59894 354 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 E2F1Q01094 437 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 BIRC2Q13490 618 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 SNX1Q13596 522 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 CDKN3Q16667 212 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 LONRF2Q1L5Z9 754 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 PARP6Q2NL67 630 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 ZDHHC20Q5W0Z9 365 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 GSTA5Q7RTV2 222 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 TMC3Q7Z5M5 1100 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 TAB3Q8N5C8 712 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-215ENST00000528396 ARL10Q8N8L6 244 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 SLC35B2Q8TB61 432 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 NAT6Q93015 286 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 AGAP2Q99490 1192 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 TBL1YQ9BQ87 522 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 APOL2Q9BQE5 337 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 FRMD8Q9BZ67 464 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-215ENST00000528396 TMEM168Q9H0V1 697 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 DPEP2Q9H4A9 486 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 LRRC40Q9H9A6 602 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 BPIFA1Q9NP55 256 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 ZNHIT2Q9UHR6 403 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 SUFUQ9UMX1 484 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 SLC17A4Q9Y2C5 497 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 JRKLQ9Y4A0 524 aa13.3□□□□□ -0.28
CAPN1-215ENST00000528396 IGF2RP11717 2491 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 E7EVH7 732 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 STX7O15400 261 aaKnown RBP13.29□□□□□ -0.28
CAPN1-215ENST00000528396 PSMD3O43242 534 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 PPFIA2O75334 1257 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 SLC25A14O95258 325 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-215ENST00000528396 SOD1P00441 154 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 IVLP07476 585 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 GIMD1P0DJR0 217 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 MYF5P13349 255 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 JUPP14923 745 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 CXCR5P32302 372 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 HENMT1Q5T8I9 393 aaKnown RBP13.29□□□□□ -0.28
CAPN1-215ENST00000528396 PDPK2PQ6A1A2 396 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 NYAP1Q6ZVC0 841 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 EFL1Q7Z2Z2 1120 aaKnown RBP13.29□□□□□ -0.28
CAPN1-215ENST00000528396 TMPRSS12Q86WS5 348 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 PHYKPLQ8IUZ5 450 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 TRAM1L1Q8N609 369 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 GDAP1Q8TB36 358 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 IFI44Q8TCB0 444 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 MAPK15Q8TD08 544 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 PLEKHG4BQ96PX9 1271 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 OR2M4Q96R27 311 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 BOCQ9BWV1 1114 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 TLR10Q9BXR5 811 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 TRNAU1APQ9NX07 287 aaKnown RBP13.29□□□□□ -0.28
CAPN1-215ENST00000528396 TRMT1Q9NXH9 659 aaKnown RBP13.29□□□□□ -0.28
CAPN1-215ENST00000528396 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.29□□□□□ -0.28
CAPN1-215ENST00000528396 FEZ2Q9UHY8 353 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-215ENST00000528396 PADI4Q9UM07 663 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 MSRB2Q9Y3D2 182 aa13.29□□□□□ -0.28
CAPN1-215ENST00000528396 B4DGG1 531 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 AURKAO14965 403 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 USP12O75317 370 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 DKK1O94907 266 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 CRTAMO95727 393 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 GAS8O95995 478 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 ATP1A1P05023 1023 aaKnown RBP13.28□□□□□ -0.28
CAPN1-215ENST00000528396 GP1BAP07359 652 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms