RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TCTN1Q2MV58 587 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 SLC30A6Q6NXT4 461 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 TATDN1Q6P1N9 297 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 FBXO46Q6PJ61 603 aaPredicted RBP5.91□□□□□ -1.46
PCF11-202ENST00000528336 LCTLQ6UWM7 567 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 SDCCAG8Q86SQ7 713 aaPredicted RBP5.91□□□□□ -1.46
PCF11-202ENST00000528336 AADATQ8N5Z0 425 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 UCMAQ8WVF2 138 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 NCAPGQ9BPX3 1015 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 CHMP4BQ9H444 224 aaKnown RBP5.91□□□□□ -1.46
PCF11-202ENST00000528336 ZWILCHQ9H900 591 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 TRPV4Q9HBA0 871 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 DCAF16Q9NXF7 216 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 WDR35Q9P2L0 1181 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 WNT16Q9UBV4 365 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 REREQ9P2R6 1566 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 DIP2CQ9Y2E4 1556 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 ABCA6Q8N139 1617 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 ROCK1Q13464 1354 aa5.91□□□□□ -1.46
PCF11-202ENST00000528336 KIDINS220Q9ULH0 1771 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 ADGRL2O95490 1459 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 PLXNC1O60486 1568 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 LRRC53A6NM62 1247 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 SEC14L5O43304 696 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 KCNAB3O43448 404 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 DOK2O60496 412 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 NDUFB4O95168 129 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 RTN3O95197 1032 aaPredicted RBP5.9□□□□□ -1.46
PCF11-202ENST00000528336 CH25HO95992 272 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 ADRB2P07550 413 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 TPM2P07951 284 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 PLA2G2AP14555 144 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 IL11P20809 199 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 TNFRSF8P28908 595 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 TKTP29401 623 aaKnown RBP5.9□□□□□ -1.46
PCF11-202ENST00000528336 SHMT1P34896 483 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 EIF3BP55884 814 aaKnown RBP5.9□□□□□ -1.46
PCF11-202ENST00000528336 TRAF3Q13114 568 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 NEDD9Q14511 834 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 GSTA3Q16772 222 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 MMEL1Q495T6 779 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 SGO1Q5FBB7 561 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 RPUSD3Q6P087 351 aaKnown RBP5.9□□□□□ -1.46
PCF11-202ENST00000528336 C8orf82Q6P1X6 216 aaPredicted RBP5.9□□□□□ -1.46
PCF11-202ENST00000528336 KLHL24Q6TFL4 600 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 CLIP4Q8N3C7 705 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 METTL6Q8TCB7 284 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 PHF21BQ96EK2 531 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 NR1H4Q96RI1 486 aaPredicted RBP5.9□□□□□ -1.46
PCF11-202ENST00000528336 SLF1Q9BQI6 1058 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 DDX4Q9NQI0 724 aaKnown RBP5.9□□□□□ -1.46
PCF11-202ENST00000528336 OCIAD1Q9NX40 245 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 TAS2R10Q9NYW0 307 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 TBC1D29Q9UFV1 150 aa5.9□□□□□ -1.46
PCF11-202ENST00000528336 AGO1Q9UL18 857 aaKnown RBP5.9□□□□□ -1.46
PCF11-202ENST00000528336 CROCC2H7BZ55 1655 aa5.9□□□□□ -1.47
PCF11-202ENST00000528336 SOS1Q07889 1333 aaPredicted RBP5.9□□□□□ -1.47
PCF11-202ENST00000528336 DHX29Q7Z478 1369 aaKnown RBP5.9□□□□□ -1.47
PCF11-202ENST00000528336 ANKRD30AQ9BXX3 1397 aa5.9□□□□□ -1.47
PCF11-202ENST00000528336 PTPRKQ15262 1439 aa5.9□□□□□ -1.47
PCF11-202ENST00000528336 NCOA1Q15788 1441 aa5.9□□□□□ -1.47
PCF11-202ENST00000528336 A2MP01023 1474 aa5.9□□□□□ -1.47
PCF11-202ENST00000528336 AGLP35573 1532 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 HSPA12AO43301 675 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 ZIC3O60481 467 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 TMEM63AO94886 807 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 HSPA4LO95757 839 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 MMP2P08253 660 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 AGAP20933 346 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 ARL1P40616 181 aaPredicted RBP5.89□□□□□ -1.47
PCF11-202ENST00000528336 CCR9P51686 369 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 TMF1P82094 1093 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 SORDQ00796 357 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 BNC1Q01954 994 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 TRAF2Q12933 501 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 DCTN2Q13561 401 aaKnown RBP5.89□□□□□ -1.47
PCF11-202ENST00000528336 ERV3-1Q14264 604 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 HLFQ16534 295 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 TSTQ16762 297 aaKnown RBP5.89□□□□□ -1.47
PCF11-202ENST00000528336 ZNF585BQ52M93 769 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 INO80CQ6PI98 192 aaPredicted RBP5.89□□□□□ -1.47
PCF11-202ENST00000528336 ABRAXAS1Q6UWZ7 409 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 GALNTL5Q7Z4T8 443 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 ZC3HC1Q86WB0 502 aaKnown RBP5.89□□□□□ -1.47
PCF11-202ENST00000528336 SPATA2LQ8IUW3 424 aaPredicted RBP5.89□□□□□ -1.47
PCF11-202ENST00000528336 SLC35F3Q8IY50 421 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 TDRD7Q8NHU6 1098 aaKnown RBP5.89□□□□□ -1.47
PCF11-202ENST00000528336 NUDCD2Q8WVJ2 157 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 NSUN4Q96CB9 384 aaKnown RBP5.89□□□□□ -1.47
PCF11-202ENST00000528336 MED30Q96HR3 178 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 LRFN5Q96NI6 719 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 PIP5K1AQ99755 562 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 TKTL2Q9H0I9 626 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 PLEKHA4Q9H4M7 779 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 MTRRQ9UBK8 725 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 PASKQ96RG2 1323 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 KDM3AQ9Y4C1 1321 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 KIF15Q9NS87 1388 aa5.89□□□□□ -1.47
PCF11-202ENST00000528336 hDV102S1A0JD36 115 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 PI4KAP2A4QPH2 592 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms