RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 STX16O14662 325 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 VPS4BO75351 444 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 LCP2Q13094 533 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 ADGRE1Q14246 886 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 TRIM25Q14258 630 aaKnown RBP15.28■□□□□ 0.04
USH1C-207ENST00000527720 DEFB115Q30KQ5 88 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 AARS2Q5JTZ9 985 aaKnown RBP15.28■□□□□ 0.04
USH1C-207ENST00000527720 RNF219Q5W0B1 726 aaPredicted RBP15.28■□□□□ 0.04
USH1C-207ENST00000527720 FBXO39Q8N4B4 442 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 LPCAT1Q8NF37 534 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 ADCY4Q8NFM4 1077 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 EXOC2Q96KP1 924 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 CYP2S1Q96SQ9 504 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 CLSTN3Q9BQT9 956 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 VN1R3Q9BXE9 311 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 SPAG4Q9NPE6 437 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 GKN1Q9NS71 199 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 ADA2Q9NZK5 511 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 DTNAQ9Y4J8 743 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 BRCA2P51587 3418 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 KIAA1671Q9BY89 1806 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 PRSS51A0A1B0GVH4 220 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 TRIM24O15164 1050 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 KLK8O60259 260 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 CLASP2O75122 1294 aaKnown RBP15.28■□□□□ 0.04
USH1C-207ENST00000527720 VPS26AO75436 327 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 PKMP14618 531 aaKnown RBP15.28■□□□□ 0.04
USH1C-207ENST00000527720 TSPAN8P19075 237 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 PAX7P23759 505 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 ADARP55265 1226 aaKnown RBP15.28■□□□□ 0.04
USH1C-207ENST00000527720 CDH13P55290 713 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 ARF5P84085 180 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 TAF12Q16514 161 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 GRAMD1BQ3KR37 738 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 C8orf82Q6P1X6 216 aaPredicted RBP15.28■□□□□ 0.04
USH1C-207ENST00000527720 TXNDC11Q6PKC3 985 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 TWIST2Q8WVJ9 160 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 BIRC8Q96P09 236 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 AKTIPQ9H8T0 292 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 RIMS3Q9UJD0 308 aa15.28■□□□□ 0.04
USH1C-207ENST00000527720 SUPT3HB4E1H0 165 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 MRASO14807 208 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 SUPT3HO75486 399 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 TMCC1O94876 653 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 SIX3O95343 332 aaPredicted RBP15.27■□□□□ 0.04
USH1C-207ENST00000527720 CAPNS1P04632 268 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 RPS17P08708 135 aaKnown RBP15.27■□□□□ 0.04
USH1C-207ENST00000527720 UBTFL6P0CB48 400 aaPredicted RBP15.27■□□□□ 0.04
USH1C-207ENST00000527720 PRSS56P0CW18 603 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 VCLP18206 1134 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 GPX3P22352 226 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 CLCQ05315 142 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 VEPH1Q14D04 833 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 PTPRNQ16849 979 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 ANKS6Q68DC2 871 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 NCEH1Q6PIU2 408 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 EFL1Q7Z2Z2 1120 aaKnown RBP15.27■□□□□ 0.04
USH1C-207ENST00000527720 PCYOX1LQ8NBM8 494 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 C3orf30Q96M34 536 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 RNF38Q9H0F5 515 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 CROTQ9UKG9 612 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 FAM50BQ9Y247 325 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 YIPF1Q9Y548 306 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 ASB3Q9Y575 518 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 PCDHGC4Q9Y5F7 938 aa15.27■□□□□ 0.04
USH1C-207ENST00000527720 ZNF106Q9H2Y7 1883 aaKnown RBP15.27■□□□□ 0.03
USH1C-207ENST00000527720 E7ENX8 843 aa15.27■□□□□ 0.03
USH1C-207ENST00000527720 STX7O15400 261 aaKnown RBP15.27■□□□□ 0.03
USH1C-207ENST00000527720 CD160O95971 181 aa15.27■□□□□ 0.03
USH1C-207ENST00000527720 C1RP00736 705 aa15.27■□□□□ 0.03
USH1C-207ENST00000527720 SOD2P04179 222 aa15.27■□□□□ 0.03
USH1C-207ENST00000527720 C8BP07358 591 aa15.27■□□□□ 0.03
USH1C-207ENST00000527720 ALDOCP09972 364 aaKnown RBP15.27■□□□□ 0.03
USH1C-207ENST00000527720 MC4RP32245 332 aa15.27■□□□□ 0.03
USH1C-207ENST00000527720 GEN1Q17RS7 908 aa15.27■□□□□ 0.03
USH1C-207ENST00000527720 SAMD4BQ5PRF9 694 aaKnown RBP15.27■□□□□ 0.03
USH1C-207ENST00000527720 PCDH20Q8N6Y1 951 aaKnown RBP15.27■□□□□ 0.03
USH1C-207ENST00000527720 RNF148Q8N7C7 305 aa15.27■□□□□ 0.03
USH1C-207ENST00000527720 GPR21Q99679 349 aa15.27■□□□□ 0.03
USH1C-207ENST00000527720 TMEM181Q9P2C4 612 aa15.27■□□□□ 0.03
USH1C-207ENST00000527720 DENND4CQ5VZ89 1909 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 TSPAN3O60637 253 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 RNASEH1O60930 286 aaKnown RBP15.26■□□□□ 0.03
USH1C-207ENST00000527720 MATN4O95460 622 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 EEF1DP29692 281 aaKnown RBP15.26■□□□□ 0.03
USH1C-207ENST00000527720 TRAF2Q12933 501 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 PAOXQ6QHF9 649 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 C16orf59Q7L2K0 433 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 PHYKPLQ8IUZ5 450 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 STK40Q8N2I9 435 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 TTC30BQ8N4P2 665 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 KCNJ9Q92806 393 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 FUBP1Q96AE4 644 aaKnown RBP15.26■□□□□ 0.03
USH1C-207ENST00000527720 DCUN1D1Q96GG9 259 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 SCLYQ96I15 445 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 TRAPPC9Q96Q05 1148 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 NUSAP1Q9BXS6 441 aaKnown RBP15.26■□□□□ 0.03
USH1C-207ENST00000527720 FAM192AQ9GZU8 254 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 Q9H521 79 aa15.26■□□□□ 0.03
USH1C-207ENST00000527720 CD300AQ9UGN4 299 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms