RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 COX14Q96I36 57 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 CDH19Q9H159 772 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 PACSIN2Q9UNF0 486 aaPredicted RBP26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 SHOC2Q9UQ13 582 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 ZNF711Q9Y462 761 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 DDX3YO15523 660 aaKnown RBP26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 KRT86O43790 486 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 PIRTP0C851 137 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 RBP3P10745 1247 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 GNPDA1P46926 289 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 POLD2P49005 469 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 DOK6Q6PKX4 331 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 OR6C4Q8NGE1 309 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 CCL4L1Q8NHW4 92 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 UBE2Q2Q8WVN8 375 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 HES6Q96HZ4 224 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 GSDMCQ9BYG8 508 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 GPR63Q9BZJ6 419 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 C10orf88Q9H8K7 445 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 RAD18Q9NS91 495 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 DKK4Q9UBT3 224 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 RSPH14Q9UHP6 348 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 CAPN6Q9Y6Q1 641 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 WDFY3Q8IZQ1 3526 aa26.21■■□□□ 1.79
TSPAN4-217ENST00000527644 GOLGA6L9A6NEM1 432 aa26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 ZNF189O75820 626 aaPredicted RBP26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 PTMAP06454 111 aaKnown RBP26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 ILF3Q12906 894 aaKnown RBP eCLIP26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 MPP3Q13368 585 aa26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 PERM1Q5SV97 790 aa26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 ITPRIPL1Q6GPH6 555 aa26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 DARS2Q6PI48 645 aaKnown RBP26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 GPR156Q8NFN8 814 aa26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 MDM1Q8TC05 714 aa26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 PTCD2Q8WV60 388 aaKnown RBP26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 OXNAD1Q96HP4 312 aaPredicted RBP26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 MRGPRX2Q96LB1 330 aa26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 NRSN2Q9GZP1 204 aa26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 SUDS3Q9H7L9 328 aaPredicted RBP26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 CNOT6Q9ULM6 557 aaKnown RBP26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 TMEM98Q9Y2Y6 226 aa26.2■■□□□ 1.78
TSPAN4-217ENST00000527644 INPP4BO15327 924 aa26.19■■□□□ 1.78
TSPAN4-217ENST00000527644 TRIM74Q86UV6 250 aa26.19■■□□□ 1.78
TSPAN4-217ENST00000527644 PROSER1Q86XN7 944 aa26.19■■□□□ 1.78
TSPAN4-217ENST00000527644 TTC13Q8NBP0 860 aa26.19■■□□□ 1.78
TSPAN4-217ENST00000527644 WDR48Q8TAF3 677 aa26.19■■□□□ 1.78
TSPAN4-217ENST00000527644 DEPDC7Q96QD5 511 aa26.19■■□□□ 1.78
TSPAN4-217ENST00000527644 DPEP2Q9H4A9 486 aa26.19■■□□□ 1.78
TSPAN4-217ENST00000527644 NFKBIL1Q9UBC1 381 aaPredicted RBP26.19■■□□□ 1.78
TSPAN4-217ENST00000527644 GUCA1BQ9UMX6 200 aa26.19■■□□□ 1.78
TSPAN4-217ENST00000527644 MYLKQ15746 1914 aa26.19■■□□□ 1.78
TSPAN4-217ENST00000527644 F5H423 210 aaPredicted RBP26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 STK10O94804 968 aaKnown RBP26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 ADCY8P40145 1251 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 DCDC1P59894 354 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 CYP4F3Q08477 520 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 PEX6Q13608 980 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 SIRPB2Q5JXA9 342 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 NRROSQ86YC3 692 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 IPMKQ8NFU5 416 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 NXPE2Q96DL1 559 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 FAM118BQ9BPY3 351 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 CCDC3Q9BQI4 270 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 GBA3Q9H227 469 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 TRABDQ9H4I3 376 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 VPS18Q9P253 973 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 SPO11Q9Y5K1 396 aa26.18■■□□□ 1.78
TSPAN4-217ENST00000527644 RP1P56715 2156 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 FADS2P1A8MWK0 482 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 KCNN4O15554 427 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 NOBOXO60393 691 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 ANXA9O76027 345 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 ASMTLO95671 621 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 HLA-DPA1P20036 260 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 GEMP55040 296 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 CTBSQ01459 385 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 SLC1A5Q15758 541 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 ANKRD20A2Q5SQ80 823 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 ANKRD20A1Q5TYW2 823 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 ANKRD20A3Q5VUR7 823 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 LRRC8AQ8IWT6 810 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 GPR26Q8NDV2 337 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 OR2M4Q96R27 311 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 ZSCAN5AQ9BUG6 496 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 SPATA16Q9BXB7 569 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 GPSM3Q9Y4H4 160 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 FREM2Q5SZK8 3169 aa26.17■■□□□ 1.78
TSPAN4-217ENST00000527644 B4DGG1 531 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 TAF4O00268 1085 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 TCEA3O75764 348 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 SLC4A1P02730 911 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 RTP5Q14D33 572 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 C14orf28Q4W4Y0 310 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 PYCR3Q53H96 274 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 PDPK2PQ6A1A2 396 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 GALNT13Q8IUC8 556 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 SLC25A41Q8N5S1 370 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 CCDC74AQ96AQ1 378 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 FSD1LQ9BXM9 530 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 SPATS2LQ9NUQ6 558 aaKnown RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms