RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 DNASE2BQ8WZ79 361 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 ST8SIA4Q92187 359 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 IGSF8Q969P0 613 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 ZUFSPQ96AP4 578 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 TCEAL4Q96EI5 215 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 TIGD1Q96MW7 591 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 C7orf26Q96N11 449 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 LRRC3BQ96PB8 259 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 MTMR9Q96QG7 549 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 DCLRE1CQ96SD1 692 aaKnown RBP3.23□□□□□ -1.89
CSDE1-209ENST00000525132 MLST8Q9BVC4 326 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 CCDC68Q9H2F9 335 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 KAT14Q9H8E8 782 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 USP29Q9HBJ7 922 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 SH3GLB2Q9NR46 395 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 TMEM140Q9NV12 185 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 TMEM160Q9NX00 188 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 SIDT1Q9NXL6 827 aaKnown RBP3.23□□□□□ -1.89
CSDE1-209ENST00000525132 ZDHHC8Q9ULC8 765 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 ENTPD2Q9Y5L3 495 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 DMBT1Q9UGM3 2413 aaPredicted RBP3.23□□□□□ -1.89
CSDE1-209ENST00000525132 FOCADQ5VW36 1801 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 MYH2Q9UKX2 1941 aa3.23□□□□□ -1.89
CSDE1-209ENST00000525132 GPR75-ASB3A0A0A6YYF3 556 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 CENPVL1A0A0U1RR11 272 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 A0A1B0GUH1 482 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 WDR27A2RRH5 827 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 MBD3L4A6NDZ8 208 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 MBD3L3A6NE82 208 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 TRIM64A6NGJ6 449 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 TRIM64BA6NI03 449 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 BTBD18B2RXH4 712 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 NPIPB8E9PQR5 432 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 G3V4G9 280 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 MYO1CO00159 1063 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 ATP2A1O14983 1001 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 PAPSS1O43252 624 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 DNPH1O43598 174 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 AKAP8O43823 692 aaKnown RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 AHCYL1O43865 530 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 SLC43A1O75387 559 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 ZFPL1O95159 310 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 MATN4O95460 622 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 GH1P01241 217 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 PRKCBP05771 671 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 CD1AP06126 327 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 GALTP07902 379 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 NPPBP16860 134 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 ATP5JP18859 108 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 IL1R2P27930 398 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 CIITAP33076 1130 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 GALNSP34059 522 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 POLD2P49005 469 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 CCR5P51681 352 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 PRKAA2P54646 552 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 ACTR2P61160 394 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 AP2B1P63010 937 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 MXRA7P84157 204 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 ZBED6P86452 979 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 FCHO2Q0JRZ9 810 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 TAF11Q15544 211 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 CRB2Q5IJ48 1285 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 SLC9C2Q5TAH2 1124 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 ACAD10Q6JQN1 1059 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 EFCAB12Q6NXP0 572 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 DUS1LQ6P1R4 473 aaKnown RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 FAM43BQ6ZT52 329 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 KIAA0408Q6ZU52 694 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 ENOSF1Q7L5Y1 443 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 ZNF627Q7L945 461 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 GSPT2Q8IYD1 628 aaKnown RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 ZMIZ2Q8NF64 920 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 OR56A1Q8NGH5 318 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 OR56A3Q8NH54 315 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 ZNF483Q8TF39 744 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 SLC25A43Q8WUT9 341 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 RXFP2Q8WXD0 754 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 WASF1Q92558 559 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 LARP4BQ92615 738 aaKnown RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 SDCCAG3Q96C92 435 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 ZMAT2Q96NC0 199 aaKnown RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 COL21A1Q96P44 957 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 TRAPPC9Q96Q05 1148 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 AGXT2Q9BYV1 514 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 C11orf54Q9H0W9 315 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 PCDHAC1Q9H158 963 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 PABPC3Q9H361 631 aaKnown RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 GHITMQ9H3K2 345 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 SYBUQ9NX95 663 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 NSMCE4AQ9NXX6 385 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 HSFX1Q9UBD0 423 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 MID2Q9UJV3 735 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 MTO1Q9Y2Z2 717 aaKnown RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 MAGED1Q9Y5V3 778 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-209ENST00000525132 SLCO1B1Q9Y6L6 691 aa3.22□□□□□ -1.89
CSDE1-209ENST00000525132 TNRC6AQ8NDV7 1962 aaKnown RBP3.21□□□□□ -1.89
CSDE1-209ENST00000525132 ABCA1O95477 2261 aa3.21□□□□□ -1.9
CSDE1-209ENST00000525132 A0A087WZ62 844 aa3.21□□□□□ -1.9
CSDE1-209ENST00000525132 FAM170AA1A519 330 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms