RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 FRG2Q64ET8 278 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 KIAA0930Q6ICG6 404 aaPredicted RBP3.83□□□□□ -1.8
PCM1-220ENST00000523896 FJX1Q86VR8 437 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 ADHFE1Q8IWW8 467 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 TEX11Q8IYF3 940 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 SRBD1Q8N5C6 995 aaKnown RBP3.83□□□□□ -1.8
PCM1-220ENST00000523896 ELP5Q8TE02 316 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 WFIKKN2Q8TEU8 576 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 ZKSCAN4Q969J2 545 aaPredicted RBP3.83□□□□□ -1.8
PCM1-220ENST00000523896 KXD1Q9BQD3 176 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 ZPBPQ9BS86 351 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 MAK16Q9BXY0 300 aaKnown RBP3.83□□□□□ -1.8
PCM1-220ENST00000523896 PLK3Q9H4B4 646 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 MAGIXQ9H6Y5 334 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 ACSS1Q9NUB1 689 aaPredicted RBP3.83□□□□□ -1.8
PCM1-220ENST00000523896 OGFRQ9NZT2 677 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 UBA2Q9UBT2 640 aaPredicted RBP3.83□□□□□ -1.8
PCM1-220ENST00000523896 ZNF112Q9UJU3 913 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 FBXW11Q9UKB1 542 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 ACSL5Q9ULC5 683 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 CLIC4Q9Y696 253 aa3.83□□□□□ -1.8
PCM1-220ENST00000523896 ATXN2Q99700 1313 aaKnown RBP3.83□□□□□ -1.8
PCM1-220ENST00000523896 RIMBP3CA6NJZ7 1639 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 RIMBP3BA6NNM3 1639 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 RIMBP3Q9UFD9 1639 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 IGLV5-52A0A0A0MRZ9 124 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 C1orf226A1L170 272 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 GOLGA6L9A6NEM1 432 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 SOCS6O14544 535 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 ATP2A1O14983 1001 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 AHCYL1O43865 530 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 PRSS2P07478 247 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 RRM1P23921 792 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 ITGB8P26012 769 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 PON1P27169 355 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 PRCPP42785 496 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 HNRNPH2P55795 449 aaKnown RBP3.82□□□□□ -1.8
PCM1-220ENST00000523896 CSNK2A1P68400 391 aaPredicted RBP3.82□□□□□ -1.8
PCM1-220ENST00000523896 GRIK2Q13002 908 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 IKQ13123 557 aaPredicted RBP3.82□□□□□ -1.8
PCM1-220ENST00000523896 DHX34Q14147 1143 aaKnown RBP3.82□□□□□ -1.8
PCM1-220ENST00000523896 PLCB4Q15147 1175 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 HLFQ16534 295 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 ATP13A5Q4VNC0 1218 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 LRIF1Q5T3J3 769 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 CHERPQ8IWX8 916 aaKnown RBP3.82□□□□□ -1.8
PCM1-220ENST00000523896 IQCF1Q8N6M8 205 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 HJURPQ8NCD3 748 aaPredicted RBP3.82□□□□□ -1.8
PCM1-220ENST00000523896 C1orf131Q8NDD1 294 aaKnown RBP3.82□□□□□ -1.8
PCM1-220ENST00000523896 CSNK2A3Q8NEV1 391 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 TRPC4APQ8TEL6 797 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 CALML4Q96GE6 196 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 NUDT16L1Q9BRJ7 211 aaKnown RBP3.82□□□□□ -1.8
PCM1-220ENST00000523896 NTPCRQ9BSD7 190 aaKnown RBP3.82□□□□□ -1.8
PCM1-220ENST00000523896 C1QTNF1Q9BXJ1 281 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 TMX4Q9H1E5 349 aaPredicted RBP3.82□□□□□ -1.8
PCM1-220ENST00000523896 NOX4Q9NPH5 578 aa3.82□□□□□ -1.8
PCM1-220ENST00000523896 SUCLA2Q9P2R7 463 aaPredicted RBP3.82□□□□□ -1.8
PCM1-220ENST00000523896 CCDC180Q9P1Z9 1646 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 KANSL1LA0AUZ9 987 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 hDV102S1A0JD36 115 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 PRR23D1E9PI22 279 aaPredicted RBP3.81□□□□□ -1.8
PCM1-220ENST00000523896 MAP2K7O14733 419 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 OGG1O15527 345 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 RFPL2O75678 378 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 GJB3O75712 270 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 EGFP01133 1207 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 HIST1H2ABP04908 130 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 PRR23D2P0DMB1 279 aaPredicted RBP3.81□□□□□ -1.8
PCM1-220ENST00000523896 SRCP12931 536 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 HIST1H2ADP20671 130 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 CLCNKAP51800 687 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 SNX16P57768 344 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 FOXM1Q08050 763 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 OASLQ15646 514 aaKnown RBP3.81□□□□□ -1.8
PCM1-220ENST00000523896 CTF1Q16619 201 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 PNLIPRP3Q17RR3 467 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 SETMARQ53H47 684 aaPredicted RBP3.81□□□□□ -1.8
PCM1-220ENST00000523896 ZNF805Q5CZA5 627 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 XKR9Q5GH70 373 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 PAPPA-AS1Q5QFB9 102 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 SLC36A4Q6YBV0 504 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 HIST3H2AQ7L7L0 130 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 BEST3Q8N1M1 668 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 C17orf53Q8N3J3 647 aaPredicted RBP3.81□□□□□ -1.8
PCM1-220ENST00000523896 MAGEC3Q8TD91 643 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 RND1Q92730 232 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 EGLN2Q96KS0 407 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 SEZ6LQ9BYH1 1024 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 MTMR10Q9NXD2 777 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 MCM9Q9NXL9 1143 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 COPG2Q9UBF2 871 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 OR14J1Q9UGF5 321 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 NENFQ9UMX5 172 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 TMEM5Q9Y2B1 443 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 R3HDM2Q9Y2K5 976 aaKnown RBP3.81□□□□□ -1.8
PCM1-220ENST00000523896 LRP12Q9Y561 859 aa3.81□□□□□ -1.8
PCM1-220ENST00000523896 BICRAQ9NZM4 1560 aa3.8□□□□□ -1.8
PCM1-220ENST00000523896 A0A1W2PQ09 198 aa3.8□□□□□ -1.8
PCM1-220ENST00000523896 M0QZ24 198 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms