RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 DNPEPQ9ULA0 475 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 RPL26L1Q9UNX3 145 aaKnown RBP20.59■□□□□ 0.89
SDCBP-209ENST00000522243 ZFC3H1O60293 1989 aaKnown RBP20.58■□□□□ 0.89
SDCBP-209ENST00000522243 SCN8AQ9UQD0 1980 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 RHPN2P1A8MT19 583 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 ZNF487B1APH4 448 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 ANKRD66B4E2M5 251 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 ITGA2BP08514 1039 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 COMTP21964 271 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 TMPRSS3P57727 454 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 TBX2Q13207 712 aaPredicted RBP20.58■□□□□ 0.89
SDCBP-209ENST00000522243 BIRC2Q13490 618 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 PDK1Q15118 436 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 MAP9Q49MG5 647 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 ARHGAP40Q5TG30 622 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 MFSD7Q6UXD7 560 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 CLEC14AQ86T13 490 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 NLRP8Q86W28 1048 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 C17orf82Q86X59 251 aaPredicted RBP20.58■□□□□ 0.89
SDCBP-209ENST00000522243 RHOT1Q8IXI2 618 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 EXD1Q8NHP7 514 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 SCARF2Q96GP6 870 aaPredicted RBP20.58■□□□□ 0.89
SDCBP-209ENST00000522243 AGAP3Q96P47 875 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 LYSMD1Q96S90 227 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 DPH1Q9BZG8 443 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 CDH19Q9H159 772 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 PISDQ9UG56 409 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 LOXL2Q9Y4K0 774 aa20.58■□□□□ 0.89
SDCBP-209ENST00000522243 OAS3Q9Y6K5 1087 aaKnown RBP20.58■□□□□ 0.89
SDCBP-209ENST00000522243 ITPR1Q14643 2758 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 TRBV23OR9-2A0A075B6M9 112 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 SPOPO43791 374 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 PRB1P04280 392 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 ATP1A1P05023 1023 aaKnown RBP20.57■□□□□ 0.88
SDCBP-209ENST00000522243 PYGLP06737 847 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 JMJD7P0C870 316 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 ITIH1P19827 911 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 SLC5A2P31639 672 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 SPINT3P49223 89 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 ZFP36L1Q07352 338 aaKnown RBP20.57■□□□□ 0.88
SDCBP-209ENST00000522243 EIF3IQ13347 325 aaKnown RBP20.57■□□□□ 0.88
SDCBP-209ENST00000522243 PYCR3Q53H96 274 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 PHF19Q5T6S3 580 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 LRRC38Q5VT99 294 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 USP53Q70EK8 1073 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 COX14Q96I36 57 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 OLFM3Q96PB7 478 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 BRD8Q9H0E9 1235 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 SEMA6CQ9H3T2 930 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 GOLPH3Q9H4A6 298 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 DDX56Q9NY93 547 aaKnown RBP20.57■□□□□ 0.88
SDCBP-209ENST00000522243 PKD2L2Q9NZM6 624 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 INTUQ9ULD6 942 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 PRKAB1Q9Y478 270 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 PCYT1BQ9Y5K3 369 aaPredicted RBP20.57■□□□□ 0.88
SDCBP-209ENST00000522243 NBEAQ8NFP9 2946 aa20.57■□□□□ 0.88
SDCBP-209ENST00000522243 PTPRQQ9UMZ3 2332 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 TEX51A0A1B0GUA7 166 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 FADS2P1A8MWK0 482 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 PIRTP0C851 137 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 ZFXP17010 805 aaPredicted RBP20.56■□□□□ 0.88
SDCBP-209ENST00000522243 MLLT3P42568 568 aaPredicted RBP20.56■□□□□ 0.88
SDCBP-209ENST00000522243 SLC1A1P43005 524 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 NOP2P46087 812 aaKnown RBP20.56■□□□□ 0.88
SDCBP-209ENST00000522243 PCSK7Q16549 785 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 LYSMD3Q7Z3D4 306 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 NT5DC3Q86UY8 548 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 VSIG1Q86XK7 387 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 GALNT13Q8IUC8 556 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 CCHCR1Q8TD31 782 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 CCDC97Q96F63 343 aaPredicted RBP20.56■□□□□ 0.88
SDCBP-209ENST00000522243 ADGRE3Q9BY15 652 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 TRIM5Q9C035 493 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 FAM83DQ9H4H8 585 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.56■□□□□ 0.88
SDCBP-209ENST00000522243 SAE1Q9UBE0 346 aaPredicted RBP20.56■□□□□ 0.88
SDCBP-209ENST00000522243 ZNHIT2Q9UHR6 403 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 CNOT6Q9ULM6 557 aaKnown RBP20.56■□□□□ 0.88
SDCBP-209ENST00000522243 TFR2Q9UP52 801 aa20.56■□□□□ 0.88
SDCBP-209ENST00000522243 PPP1R12AO14974 1030 aaPredicted RBP20.55■□□□□ 0.88
SDCBP-209ENST00000522243 ATXN7O15265 892 aaPredicted RBP20.55■□□□□ 0.88
SDCBP-209ENST00000522243 PPM1DO15297 605 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 SLC4A1P02730 911 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 ETV5P41161 510 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 MAGEA1P43355 309 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 UCNP55089 124 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 CLN3Q13286 438 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 TCEAL1Q15170 157 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 KAZNQ674X7 775 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 ZNF438Q7Z4V0 828 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 PIM3Q86V86 326 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 SLITRK4Q8IW52 837 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 SLC39A7Q92504 469 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 IMP4Q96G21 291 aaKnown RBP20.55■□□□□ 0.88
SDCBP-209ENST00000522243 TRIB3Q96RU7 358 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 NUDT22Q9BRQ3 303 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 ANP32EQ9BTT0 268 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 SHOC2Q9UQ13 582 aa20.55■□□□□ 0.88
SDCBP-209ENST00000522243 DNAJC6O75061 913 aa20.54■□□□□ 0.88
SDCBP-209ENST00000522243 CPNE6O95741 557 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms