RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 FZD10Q9ULW2 581 aa13.79□□□□□ -0.2
SYNPO-205ENST00000522122 SAMHD1Q9Y3Z3 626 aaKnown RBP13.79□□□□□ -0.2
SYNPO-205ENST00000522122 ANKDD1BA6NHY2 528 aa13.79□□□□□ -0.2
SYNPO-205ENST00000522122 RFXANKO14593 260 aa13.79□□□□□ -0.2
SYNPO-205ENST00000522122 PKMP14618 531 aaKnown RBP13.79□□□□□ -0.2
SYNPO-205ENST00000522122 GPR158Q5T848 1215 aa13.79□□□□□ -0.2
SYNPO-205ENST00000522122 RBFAQ8N0V3 343 aa13.79□□□□□ -0.2
SYNPO-205ENST00000522122 SPATA22Q8NHS9 363 aa13.79□□□□□ -0.2
SYNPO-205ENST00000522122 QRFPRQ96P65 431 aa13.79□□□□□ -0.2
SYNPO-205ENST00000522122 UNC93B1Q9H1C4 597 aa13.79□□□□□ -0.2
SYNPO-205ENST00000522122 RPS6KB2Q9UBS0 482 aa13.79□□□□□ -0.2
SYNPO-205ENST00000522122 PIPSLA2A3N6 862 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 RPP40O75818 363 aaKnown RBP13.78□□□□□ -0.2
SYNPO-205ENST00000522122 TSPAN19P0C672 248 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 GCAP28676 217 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 IFNGR2P38484 337 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 SLC9B1Q4ZJI4 515 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 LYPLAL1Q5VWZ2 237 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 HDHD2Q9H0R4 259 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 VPS51Q9UID3 782 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 BTBD3Q9Y2F9 522 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 TCAF1Q9Y4C2 921 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 CENPXA8MT69 81 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 PRMT5O14744 637 aaPredicted RBP13.78□□□□□ -0.2
SYNPO-205ENST00000522122 TBL1XO60907 577 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 MMP3P08254 477 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 SFSWAPQ12872 951 aaKnown RBP13.78□□□□□ -0.2
SYNPO-205ENST00000522122 FGD2Q7Z6J4 655 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 SPPL2CQ8IUH8 684 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 OR4K2Q8NGD2 314 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 ENKURQ8TC29 256 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 SLC9A7Q96T83 725 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 EPB41L1Q9H4G0 881 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 ARMC7Q9H6L4 198 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 DPP7Q9UHL4 492 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 RFPL1O75677 317 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 HPGDP15428 266 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 PFKPQ01813 784 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 PLCL1Q15111 1095 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 PERM1Q5SV97 790 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 TREML1Q86YW5 311 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 AHI1Q8N157 1196 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 UBE2E3Q969T4 207 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 SERHL2Q9H4I8 314 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 SERHLQ9NQF3 203 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 IKZF3Q9UKT9 509 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 CTPS1P17812 591 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 POLR2EP19388 210 aaKnown RBP13.78□□□□□ -0.2
SYNPO-205ENST00000522122 NOS3P29474 1203 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 HTR7P34969 479 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 SMAD3P84022 425 aaKnown RBP13.78□□□□□ -0.2
SYNPO-205ENST00000522122 ESRP1Q6NXG1 681 aaKnown RBP13.78□□□□□ -0.2
SYNPO-205ENST00000522122 DET1Q7L5Y6 550 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 ZBTB46Q86UZ6 589 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 UNC5BQ8IZJ1 945 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 FSTL5Q8N475 847 aaPredicted RBP13.78□□□□□ -0.2
SYNPO-205ENST00000522122 TBATAQ96M53 351 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 COPS8Q99627 209 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 DPEP3Q9H4B8 488 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 PCDH12Q9NPG4 1184 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 CIDEBQ9UHD4 219 aa13.78□□□□□ -0.2
SYNPO-205ENST00000522122 TCF3P15923 654 aa13.77□□□□□ -0.2
SYNPO-205ENST00000522122 YBEYP58557 167 aaPredicted RBP13.77□□□□□ -0.2
SYNPO-205ENST00000522122 LILRA4P59901 499 aa13.77□□□□□ -0.2
SYNPO-205ENST00000522122 GLYATQ6IB77 296 aa13.77□□□□□ -0.2
SYNPO-205ENST00000522122 EIF3MQ7L2H7 374 aaKnown RBP13.77□□□□□ -0.2
SYNPO-205ENST00000522122 IRGQQ8WZA9 623 aa13.77□□□□□ -0.2
SYNPO-205ENST00000522122 NELL1Q92832 810 aa13.77□□□□□ -0.2
SYNPO-205ENST00000522122 ZHX1-C8orf76Q96EF9 292 aa13.77□□□□□ -0.2
SYNPO-205ENST00000522122 ITCHQ96J02 903 aa13.77□□□□□ -0.2
SYNPO-205ENST00000522122 PPM1MQ96MI6 270 aa13.77□□□□□ -0.2
SYNPO-205ENST00000522122 NLNQ9BYT8 704 aa13.77□□□□□ -0.2
SYNPO-205ENST00000522122 TAF1P21675 1872 aa13.77□□□□□ -0.2
SYNPO-205ENST00000522122 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 KDM4FA0A1W2PPD8 638 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 A0A1W2PQH9 124 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 TRMUO75648 421 aaKnown RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 RHOQP17081 205 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 C4BPBP20851 252 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 NMBRP28336 390 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF252P-AS1Q0IIN9 211 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 LPIN1Q14693 890 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 USP39Q53GS9 565 aaKnown RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 REP15Q6BDI9 236 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 CNSTQ6PJW8 725 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 ADGRG6Q86SQ4 1221 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 DEPDC4Q8N2C3 294 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 MYDGFQ969H8 173 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 PEBP4Q96S96 227 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 DHRS4Q9BTZ2 278 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 SLC25A51Q9H1U9 297 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF395Q9H8N7 513 aaPredicted RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 POLR3HQ9Y535 204 aaPredicted RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 TNRC6CQ9HCJ0 1690 aaKnown RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 SOWAHBA6NEL2 793 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 OR6C75A6NL08 312 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 NDST3O95803 873 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF37AP17032 561 aaPredicted RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 FAM91A1Q658Y4 838 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 FBXL19Q6PCT2 694 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms