RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	TSPAN7	P41732	249 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	TAS2R38	P59533	333 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	EEF1A1	P68104	462 aa	Known RBP	4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	PDE1B	Q01064	536 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	ACSM2A	Q08AH3	577 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	ADIPOQ	Q15848	244 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	EEF1A1P5	Q5VTE0	462 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZNF280D	Q6N043	979 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	MAB21L3	Q8N8X9	362 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	DUSP19	Q8WTR2	217 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	NR4A3	Q92570	626 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	SMARCE1	Q969G3	411 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	RHBDF1	Q96CC6	855 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	ARHGEF26	Q96DR7	871 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	QRFPR	Q96P65	431 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	NODAL	Q96S42	347 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	PCGF1	Q9BSM1	259 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	MMP28	Q9H239	520 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	MAGIX	Q9H6Y5	334 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZNF69	Q9UC07	566 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	POU2F3	Q9UKI9	436 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	KCNS2	Q9ULS6	477 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	DLGAP4	Q9Y2H0	992 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115	ADAM18	Q9Y3Q7	739 aa		4.14	□□□□□ -1.75
PTPN12-215	ENST00000522115		J3KRW8	73 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	SNAP23	O00161	211 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	HCRTR2	O43614	444 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	RTN3	O95197	1032 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	EGF	P01133	1207 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	ITGA2	P17301	1181 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	KRT9	P35527	623 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	IL15	P40933	162 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	RGS2	P41220	211 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	APOBEC1	P41238	236 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	MPP1	Q00013	466 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	DCTN2	Q13561	401 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZNF234	Q14588	700 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	MYLK3	Q32MK0	819 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	CDON	Q4KMG0	1287 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZNF628	Q5EBL2	1059 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	DCST1	Q5T197	706 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	LCN10	Q6JVE6	187 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	MEX3B	Q6ZN04	569 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	ASB18	Q6ZVZ8	466 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	USP43	Q70EL4	1123 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	DCUN1D3	Q8IWE4	304 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	RNF168	Q8IYW5	571 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	PIGT	Q969N2	578 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	ORAI1	Q96D31	301 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	MTERF1	Q99551	399 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	SEPT5	Q99719	369 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	CMKLR1	Q99788	373 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	SYT17	Q9BSW7	474 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	LRRC1	Q9BTT6	524 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	SLC26A6	Q9BXS9	759 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	CSTL1	Q9H114	145 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	PDZD7	Q9H5P4	517 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	SEBOX	Q9HB31	216 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	TCF7L2	Q9NQB0	619 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	ABCF3	Q9NUQ8	709 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	MAU2	Q9Y6X3	613 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	PTPRC	P08575	1304 aa		4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	TDRD9	Q8NDG6	1382 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-215	ENST00000522115	JRK	O75564	520 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	NKX2-2	O95096	273 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	HSPA1A	P0DMV8	641 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	HSPA1B	P0DMV9	641 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	KRT10	P13645	584 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	MYOD1	P15172	320 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	CDH2	P19022	906 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	UGT1A1	P22309	533 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	GNL1	P36915	607 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	F2RL1	P55085	397 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	NIPAL4	Q0D2K0	466 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	GAGE5	Q13069	117 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	GAGE6	Q13070	117 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	MAD2L1	Q13257	205 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	TBCE	Q15813	527 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	TST	Q16762	297 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	CCDC70	Q6NSX1	233 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	GDPD4	Q6W3E5	623 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	TMTC3	Q6ZXV5	915 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	DSG4	Q86SJ6	1040 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZNF329	Q86UD4	541 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	NFE4	Q86UQ8	179 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	ARHGAP12	Q8IWW6	846 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	CNTROB	Q8N137	903 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	SRBD1	Q8N5C6	995 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	OR5R1	Q8NH85	324 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	OR14L1P	Q8NHC6	308 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	BBS10	Q8TAM1	723 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	APBB2	Q92870	758 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	PERP	Q96FX8	193 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	UHRF2	Q96PU4	802 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	LIMA1	Q9UHB6	759 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	PADI3	Q9ULW8	664 aa		4.12	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZNF711	Q9Y462	761 aa		4.12	□□□□□ -1.75

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