RNA–Protein interactions for RNA: ENST00000521671.1

ATP6V1C1-206, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 3

Gene ATP6V1C1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-206ENST00000521671 ZSCAN31Q96LW9 406 aaPredicted RBP3.36□□□□□ -1.87
ATP6V1C1-206ENST00000521671 HERPUD2Q9BSE4 406 aa3.36□□□□□ -1.87
ATP6V1C1-206ENST00000521671 PHF7Q9BWX1 381 aaPredicted RBP3.36□□□□□ -1.87
ATP6V1C1-206ENST00000521671 PPP1R3EQ9H7J1 279 aa3.36□□□□□ -1.87
ATP6V1C1-206ENST00000521671 GPR108Q9NPR9 543 aa3.36□□□□□ -1.87
ATP6V1C1-206ENST00000521671 IL1RAPL1Q9NZN1 696 aa3.36□□□□□ -1.87
ATP6V1C1-206ENST00000521671 C2CD2Q9Y426 696 aa3.36□□□□□ -1.87
ATP6V1C1-206ENST00000521671 CTAGE9A4FU28 777 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 CIDEAO60543 219 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 PEX14O75381 377 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 MT-CYBP00156 380 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 CTAGE8P0CG41 777 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 ERVK-10P10266 1014 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 POLR2CP19387 275 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 HOXA13P31271 388 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 HOXC8P31273 242 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 HALP42357 657 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 CSRP3P50461 194 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 ZFP69Q49AA0 526 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 TMEM35AQ53FP2 167 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 TCTE1Q5JU00 501 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 GGNBP1Q5YKI7 109 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 OR7E24Q6IFN5 339 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 TADA2BQ86TJ2 420 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 TRPT1Q86TN4 253 aaKnown RBP3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 P2RY8Q86VZ1 359 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 CTAGE4Q8IX94 777 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 SPATA6LQ8N4H0 392 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 OR52I2Q8NH67 350 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 NOC3LQ8WTT2 800 aaKnown RBP3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 ZNF653Q96CK0 615 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 LINGO1Q96FE5 620 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 LINC00479Q96M42 142 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 QRFPRQ96P65 431 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 CDK19Q9BWU1 502 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 TRIM15Q9C019 465 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 NDST4Q9H3R1 872 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 RIC8AQ9NPQ8 531 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 ZDHHC18Q9NUE0 388 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 BEX4Q9NWD9 120 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 POLG2Q9UHN1 485 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 FAM96BQ9Y3D0 163 aa3.35□□□□□ -1.87
ATP6V1C1-206ENST00000521671 TEX22C9J3V5 150 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 PIP5K1CO60331 668 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 GUCY1B2O75343 617 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 HEXAP06865 529 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 FAM106CPP0CH98 169 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 RPL24P83731 157 aaKnown RBP3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 ITGA9Q13797 1035 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 ZNF239Q16600 458 aaKnown RBP3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 ZNF667Q5HYK9 610 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 FAM53AQ6NSI3 398 aaPredicted RBP3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 FAAP20Q6NZ36 180 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 ZNF790Q6PG37 636 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 FBXO46Q6PJ61 603 aaPredicted RBP3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 ANKRD18AQ8IVF6 992 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 PCDH20Q8N6Y1 951 aaKnown RBP3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 C11orf65Q8NCR3 313 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 PCYT2Q99447 389 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 MPHOSPH8Q99549 860 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 PLEKHA4Q9H4M7 779 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 HINT3Q9NQE9 182 aaKnown RBP3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 C2orf42Q9NWW7 574 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 CNOT7Q9UIV1 285 aaKnown RBP3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 GPR52Q9Y2T5 361 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 PTPRCP08575 1304 aa3.34□□□□□ -1.87
ATP6V1C1-206ENST00000521671 IFRD1O00458 451 aaPredicted RBP3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 TCERG1O14776 1098 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 URODP06132 367 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 ZNF26P17031 533 aaPredicted RBP3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 PSMC2P35998 433 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 PGM1P36871 562 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 AMPHP49418 695 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 HIST2H2ACQ16777 129 aaPredicted RBP3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 C2orf68Q2NKX9 166 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 CPLX2Q6PUV4 134 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 RBMS3Q6XE24 437 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 ZNF704Q6ZNC4 412 aaPredicted RBP3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 LRRC8DQ7L1W4 858 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 SLC46A3Q7Z3Q1 461 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 ZNF440Q8IYI8 595 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 HUS1BQ8NHY5 278 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 FAM222BQ8WU58 562 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 SLC38A5Q8WUX1 472 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 FCAMRQ8WWV6 532 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 HERVK_113Q902F9 699 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 ELP4Q96EB1 424 aa3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 LSM4Q9Y4Z0 139 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-206ENST00000521671 GAGE10A6NGK3 116 aa3.32□□□□□ -1.88
ATP6V1C1-206ENST00000521671 CTSVO60911 334 aa3.32□□□□□ -1.88
ATP6V1C1-206ENST00000521671 ZNF821O75541 412 aaPredicted RBP3.32□□□□□ -1.88
ATP6V1C1-206ENST00000521671 SHMT1P34896 483 aa3.32□□□□□ -1.88
ATP6V1C1-206ENST00000521671 CCR5P51681 352 aa3.32□□□□□ -1.88
ATP6V1C1-206ENST00000521671 EFNB1P98172 346 aa3.32□□□□□ -1.88
ATP6V1C1-206ENST00000521671 PLIN5Q00G26 463 aa3.32□□□□□ -1.88
ATP6V1C1-206ENST00000521671 FOXM1Q08050 763 aa3.32□□□□□ -1.88
ATP6V1C1-206ENST00000521671 NFIL3Q16649 462 aa3.32□□□□□ -1.88
ATP6V1C1-206ENST00000521671 KRTAP13-3Q3SY46 172 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms