RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 TMEM98Q9Y2Y6 226 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 FAM149AA5PLN7 773 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 FADS2P1A8MWK0 482 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 C1QTNF9BB2RNN3 333 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 INPP4BO15327 924 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 ZNF189O75820 626 aaPredicted RBP20.53■□□□□ 0.88
TRIM35-203ENST00000521253 ANXA9O76027 345 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 C1QTNF9P0C862 333 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 HLA-DPA1P20036 260 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 GEMP55040 296 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 NR0B2Q15466 257 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 ALS2CLQ60I27 953 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 TMPRSS12Q86WS5 348 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 FAM71DQ8N9W8 422 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 GPR26Q8NDV2 337 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 CCL4L1Q8NHW4 92 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 SLC35B2Q8TB61 432 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 COX14Q96I36 57 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 FSD1LQ9BXM9 530 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 EVA1BQ9NVM1 165 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 CNOT6Q9ULM6 557 aaKnown RBP20.53■□□□□ 0.88
TRIM35-203ENST00000521253 IGF2RP11717 2491 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 EPG5Q9HCE0 2579 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 WDFY3Q8IZQ1 3526 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 LRP4O75096 1905 aa20.53■□□□□ 0.88
TRIM35-203ENST00000521253 C5orf60A6NFR6 353 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 AGTP01019 485 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 IVLP07476 585 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 GNPDA1P46926 289 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 DCDC1P59894 354 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 HES3Q5TGS1 186 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 GUSBP11Q6P575 273 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 UNQ6494/PRO21346Q6UXR6 183 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 TAF8Q7Z7C8 310 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 SLC13A5Q86YT5 568 aaPredicted RBP20.52■□□□□ 0.88
TRIM35-203ENST00000521253 ARL10Q8N8L6 244 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 TRIM58Q8NG06 486 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 IFI44Q8TCB0 444 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 ATG4AQ8WYN0 398 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 GLMNQ92990 594 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 FICDQ9BVA6 458 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 CDH19Q9H159 772 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 CARD9Q9H257 536 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 SIRPGQ9P1W8 387 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 GPR34Q9UPC5 381 aa20.52■□□□□ 0.88
TRIM35-203ENST00000521253 AAR2Q9Y312 384 aaKnown RBP20.52■□□□□ 0.88
TRIM35-203ENST00000521253 CPED1A4D0V7 1026 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 EME2A4GXA9 379 aaPredicted RBP20.51■□□□□ 0.87
TRIM35-203ENST00000521253 FGF1P05230 155 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 GP1BAP07359 652 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 BPIP17213 487 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 RPIAP49247 311 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 GDF10P55107 478 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 E2F1Q01094 437 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 INSM1Q01101 510 aaPredicted RBP20.51■□□□□ 0.87
TRIM35-203ENST00000521253 OLIG2Q13516 323 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 PRPSAP1Q14558 356 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 EFL1Q7Z2Z2 1120 aaKnown RBP20.51■□□□□ 0.87
TRIM35-203ENST00000521253 TTC30BQ8N4P2 665 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 KYQ8NBH2 561 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 BLOC1S5Q8TDH9 187 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 SCARF2Q96GP6 870 aaPredicted RBP20.51■□□□□ 0.87
TRIM35-203ENST00000521253 TMEM121Q9BTD3 319 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 TRABDQ9H4I3 376 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 RAD18Q9NS91 495 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 TRNAU1APQ9NX07 287 aaKnown RBP20.51■□□□□ 0.87
TRIM35-203ENST00000521253 NFKBIL1Q9UBC1 381 aaPredicted RBP20.51■□□□□ 0.87
TRIM35-203ENST00000521253 GULP1Q9UBP9 304 aa20.51■□□□□ 0.87
TRIM35-203ENST00000521253 OAS3Q9Y6K5 1087 aaKnown RBP20.51■□□□□ 0.87
TRIM35-203ENST00000521253 ATP1A1P05023 1023 aaKnown RBP20.5■□□□□ 0.87
TRIM35-203ENST00000521253 ADRA1AP35348 466 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 HMGCLP35914 325 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 RANBP10Q6VN20 620 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 ARHGEF18Q6ZSZ5 1173 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 MARK2Q7KZI7 788 aaKnown RBP20.5■□□□□ 0.87
TRIM35-203ENST00000521253 NRROSQ86YC3 692 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 TRAM1L1Q8N609 369 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 FAM46DQ8NEK8 389 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 GPBAR1Q8TDU6 330 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 APOL2Q9BQE5 337 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 ZSCAN5AQ9BUG6 496 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 SPATA16Q9BXB7 569 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 TLR10Q9BXR5 811 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 BPIFA1Q9NP55 256 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 HACD3Q9P035 362 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 PADI4Q9UM07 663 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 ST14Q9Y5Y6 855 aa20.5■□□□□ 0.87
TRIM35-203ENST00000521253 MAP1BP46821 2468 aaKnown RBP20.5■□□□□ 0.87
TRIM35-203ENST00000521253 LIASO43766 372 aa20.49■□□□□ 0.87
TRIM35-203ENST00000521253 OPA1O60313 960 aa20.49■□□□□ 0.87
TRIM35-203ENST00000521253 ASMTLO95671 621 aa20.49■□□□□ 0.87
TRIM35-203ENST00000521253 JUPP14923 745 aa20.49■□□□□ 0.87
TRIM35-203ENST00000521253 ADCY8P40145 1251 aa20.49■□□□□ 0.87
TRIM35-203ENST00000521253 ILF3Q12906 894 aaKnown RBP eCLIP20.49■□□□□ 0.877e-6■■■■□ 19.9
TRIM35-203ENST00000521253 GLT6D1Q7Z4J2 308 aa20.49■□□□□ 0.87
TRIM35-203ENST00000521253 PPP1R2P1Q96PQ5 205 aa20.49■□□□□ 0.87
TRIM35-203ENST00000521253 GSDMCQ9BYG8 508 aa20.49■□□□□ 0.87
TRIM35-203ENST00000521253 VPS18Q9P253 973 aa20.49■□□□□ 0.87
TRIM35-203ENST00000521253 GPSM3Q9Y4H4 160 aa20.49■□□□□ 0.87
TRIM35-203ENST00000521253 PTPRBP23467 1997 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms