RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PIRTP0C851 137 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 PNLIPP16233 465 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 GLB1P16278 677 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 CA4P22748 312 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 ITPKBP27987 946 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 GNPDA1P46926 289 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 COPS2P61201 443 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 B4GALNT1Q00973 533 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 CTBSQ01459 385 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 GALNT3Q14435 633 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 HLTFQ14527 1009 aaKnown RBP eCLIP9.29□□□□□ -0.92
HDAC3-215ENST00000519474 SLC14A2Q15849 920 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 COL28A1Q2UY09 1125 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 PYCR3Q53H96 274 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 HENMT1Q5T8I9 393 aaKnown RBP9.29□□□□□ -0.92
HDAC3-215ENST00000519474 C11orf63Q6NUN7 778 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 KDELC1Q6UW63 502 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 BBS12Q6ZW61 710 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 DAAM2Q86T65 1068 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 TRIM74Q86UV6 250 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 ZC3H18Q86VM9 953 aaKnown RBP9.29□□□□□ -0.92
HDAC3-215ENST00000519474 GPR26Q8NDV2 337 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 ACRBPQ8NEB7 543 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 OR6C4Q8NGE1 309 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 KIAA1524Q8TCG1 905 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 CCHCR1Q8TD31 782 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 P3H4Q92791 437 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 CCDC74AQ96AQ1 378 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 GRAMD1AQ96CP6 724 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 NXPE2Q96DL1 559 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 ATXN7L3BQ96GX2 97 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 LRRN3Q9H3W5 708 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 SUDS3Q9H7L9 328 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-215ENST00000519474 C10orf88Q9H8K7 445 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 POLR1BQ9H9Y6 1135 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 ZFYVE1Q9HBF4 777 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 LUC7LQ9NQ29 371 aaKnown RBP9.29□□□□□ -0.92
HDAC3-215ENST00000519474 UBP1Q9NZI7 540 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 TAAR2Q9P1P5 351 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 APPL1Q9UKG1 709 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 DNPEPQ9ULA0 475 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 SHOC2Q9UQ13 582 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 PCYT1BQ9Y5K3 369 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-215ENST00000519474 OAS3Q9Y6K5 1087 aaKnown RBP9.29□□□□□ -0.92
HDAC3-215ENST00000519474 RNF215Q9Y6U7 377 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 ARHGEF17Q96PE2 2063 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 CHD8Q9HCK8 2581 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 AURKAO14965 403 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 PPM1DO15297 605 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 TCEA3O75764 348 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 DXOO77932 396 aaKnown RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 ECEL1O95672 775 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 NDST3O95803 873 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 EPOP01588 193 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 ATP1A1P05023 1023 aaKnown RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 PYGLP06737 847 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 PYGMP11217 842 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 CTNNA2P26232 953 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 CTNNA1P35221 906 aaKnown RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 VAV2P52735 878 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 PDX1P52945 283 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 XRCC4Q13426 336 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 PPP2R5EQ16537 467 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 PCSK7Q16549 785 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 TBC1D25Q3MII6 688 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 C14orf28Q4W4Y0 310 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 CERCAMQ5T4B2 595 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 AADACL2Q6P093 401 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 DOK6Q6PKX4 331 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 RBM44Q6ZP01 1051 aaKnown RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 LYSMD3Q7Z3D4 306 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 NAGSQ8N159 534 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 ZNF567Q8N184 647 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 ARL14Q8N4G2 192 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 Q8N9G6 341 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 LRRC57Q8N9N7 239 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 LSM14AQ8ND56 463 aaKnown RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 WDR48Q8TAF3 677 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 ZDHHC1Q8WTX9 485 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 PATE1Q8WXA2 126 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 RBM41Q96IZ5 413 aaKnown RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 CALR3Q96L12 384 aaKnown RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 SLC46A1Q96NT5 459 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 FCRL5Q96RD9 977 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 BAG1Q99933 345 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 GSDMCQ9BYG8 508 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 IMPACTQ9P2X3 320 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 ZNHIT2Q9UHR6 403 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 LHX6Q9UPM6 363 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 EFR3BQ9Y2G0 817 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 LRP4O75096 1905 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 ADAMTS20P59510 1910 aa9.28□□□□□ -0.92
HDAC3-215ENST00000519474 KMT2BQ9UMN6 2715 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 COL27A1Q8IZC6 1860 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-215ENST00000519474 AKAP13Q12802 2813 aa9.27□□□□□ -0.92
HDAC3-215ENST00000519474 UNC13CQ8NB66 2214 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 TRBV23OR9-2A0A075B6M9 112 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 PMS2P1A4D2B8 440 aa9.27□□□□□ -0.93
HDAC3-215ENST00000519474 GRID2IPA4D2P6 1211 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms