RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SCYL1Q96KG9 808 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 ASNSD1Q9NWL6 643 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 TAS2R9Q9NYW1 312 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 GRIP1Q9Y3R0 1128 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 SLC9A3R1O14745 358 aaPredicted RBP13.52□□□□□ -0.25
PABPC1-208ENST00000519004 NPHS1O60500 1241 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 KCNJ13O60928 360 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 SLC4A1P02730 911 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 IL7P13232 177 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 SERPINH1P50454 418 aaKnown RBP13.52□□□□□ -0.25
PABPC1-208ENST00000519004 ZNF45Q02386 682 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 C5orf22Q49AR2 442 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 SYT6Q5T7P8 510 aaPredicted RBP13.52□□□□□ -0.25
PABPC1-208ENST00000519004 NDUFAF5Q5TEU4 345 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 TAS1R3Q7RTX0 852 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 CLEC4FQ8N1N0 589 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 APPL2Q8NEU8 664 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 SH3KBP1Q96B97 665 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 ZHX1-C8orf76Q96EF9 292 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 TOE1Q96GM8 510 aaKnown RBP13.52□□□□□ -0.25
PABPC1-208ENST00000519004 SEPHS2Q99611 448 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 ZNF304Q9HCX3 659 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 VANGL2Q9ULK5 521 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 VPS4AQ9UN37 437 aa13.52□□□□□ -0.25
PABPC1-208ENST00000519004 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 HMX3A6NHT5 357 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 BBIP1A8MTZ0 92 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 ATP6V1G2-DDX39BF2Z307 99 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 PDPK1O15530 556 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 TBC1D4O60343 1298 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 CPNE3O75131 537 aaKnown RBP13.51□□□□□ -0.25
PABPC1-208ENST00000519004 LRIG2O94898 1065 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 LYPLA2O95372 231 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 POLBP06746 335 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 MYL3P08590 195 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 UMPSP11172 480 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 SOX10P56693 466 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 ISL1P61371 349 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 PRKCDQ05655 676 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 NFIXQ14938 502 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 SPANXN3Q5MJ09 141 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 TPRG1LQ5T0D9 272 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 FAM219BQ5XKK7 198 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 CES5AQ6NT32 575 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 TCAIMQ8N3R3 496 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 FSTL5Q8N475 847 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-208ENST00000519004 OR4M1Q8NGD0 313 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 TMBIM1Q969X1 311 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 HEXIM2Q96MH2 286 aaKnown RBP13.51□□□□□ -0.25
PABPC1-208ENST00000519004 FEM1AQ9BSK4 669 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 NAT9Q9BTE0 207 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 MCMBPQ9BTE3 642 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 ZSCAN5AQ9BUG6 496 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 ROGDIQ9GZN7 287 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 C6orf62Q9GZU0 229 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-208ENST00000519004 DCSTAMPQ9H295 470 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 KCNN2Q9H2S1 579 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 ERVK-18Q9QC07 812 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 V9GYQ6 96 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 XPNPEP2O43895 674 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 NOS1APO75052 506 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-208ENST00000519004 HNRNPLP14866 589 aaKnown RBP eCLIP13.51□□□□□ -0.25
PABPC1-208ENST00000519004 CHRM3P20309 590 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 GPX3P22352 226 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 WEE1P30291 646 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 MASP1P48740 699 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 GSK3BP49841 420 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 YWHAEP62258 255 aaKnown RBP13.51□□□□□ -0.25
PABPC1-208ENST00000519004 DGCR6Q14129 220 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 FRG1Q14331 258 aaKnown RBP13.51□□□□□ -0.25
PABPC1-208ENST00000519004 CLCA4Q14CN2 919 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 UGT3A2Q3SY77 523 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 BCL7AQ4VC05 210 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 TRNP1Q6NT89 227 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 STK32CQ86UX6 486 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 PTRH1Q86Y79 214 aaKnown RBP13.51□□□□□ -0.25
PABPC1-208ENST00000519004 RIMKLAQ8IXN7 391 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 KCTD4Q8WVF5 259 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 FYTTD1Q96QD9 318 aaKnown RBP13.51□□□□□ -0.25
PABPC1-208ENST00000519004 PHOX2BQ99453 314 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 RANGRFQ9HD47 186 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-208ENST00000519004 CHST12Q9NRB3 414 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 CISHQ9NSE2 258 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 XPR1Q9UBH6 696 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 AP3M1Q9Y2T2 418 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 DAGLAQ9Y4D2 1042 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 PCDHGB6Q9Y5F9 930 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 PCDHGA10Q9Y5H3 936 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 PCDHA9Q9Y5H5 950 aa13.51□□□□□ -0.25
PABPC1-208ENST00000519004 NR5A2O00482 541 aa13.5□□□□□ -0.25
PABPC1-208ENST00000519004 OR7A10O76100 309 aa13.5□□□□□ -0.25
PABPC1-208ENST00000519004 PRSS23O95084 383 aa13.5□□□□□ -0.25
PABPC1-208ENST00000519004 HPRP00739 348 aa13.5□□□□□ -0.25
PABPC1-208ENST00000519004 TRAPPC2P0DI81 140 aa13.5□□□□□ -0.25
PABPC1-208ENST00000519004 TRAPPC2BP0DI82 140 aa13.5□□□□□ -0.25
PABPC1-208ENST00000519004 YWHAQP27348 245 aa13.5□□□□□ -0.25
PABPC1-208ENST00000519004 ATP4BP51164 291 aa13.5□□□□□ -0.25
PABPC1-208ENST00000519004 GBE1Q04446 702 aa13.5□□□□□ -0.25
PABPC1-208ENST00000519004 TRAF3Q13114 568 aa13.5□□□□□ -0.25
PABPC1-208ENST00000519004 ZNF517Q6ZMY9 492 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms