RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 NRCAMQ92823 1304 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 UGGT1Q9NYU2 1555 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 KLF18A0A0U1RQI7 1052 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 A0A1W2PPW3 197 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 LOC390937A0A1W2PQ73 354 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 KRBOX1C9JBD0 128 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 E7EWF7 191 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 J3QRK9 145 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 M0R3G1 203 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 SNAP23O00161 211 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 RFXAPO00287 272 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 FOXN1O15353 648 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZBTB43O43298 467 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 PLA2G6O60733 806 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 BCAS1O75363 584 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 UPK1BO75841 260 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 DEXIO95424 95 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 LDOC1O95751 146 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 MMP1P03956 469 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 S100A8P05109 93 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 APOA4P06727 396 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ENO1P06733 434 aaKnown RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ANXA6P08133 673 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ASNSP08243 561 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 DLDP09622 509 aaKnown RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 CYP2D6P10635 497 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 RALBP11234 206 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 FCGR1AP12314 374 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 IL7P13232 177 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 CD247P20963 164 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 KELP23276 732 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 CHMP24386 653 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 KLRC1P26715 233 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 POU1F1P28069 291 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 RORAP35398 523 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ATP6V1E1P36543 226 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC1A4P43007 532 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 CTSKP43235 329 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 NR4A2P43354 598 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 KIR2DL1P43626 348 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 KIR2DL2P43627 348 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 RAB13P51153 203 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 HK3P52790 923 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 NDST1P52848 882 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 RAD23AP54725 363 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 HADHBP55084 474 aaKnown RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 NME5P56597 212 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 C21orf58P58505 322 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 NLRP11P59045 1033 aaKnown RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 SRSF3P84103 164 aaKnown RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ACY1Q03154 408 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 PPATQ06203 517 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 SEMA3BQ13214 749 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ERV3-1Q14264 604 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 FRG1Q14331 258 aaKnown RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 MFSD13AQ14CX5 517 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 TCEAL1Q15170 157 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC14A2Q15849 920 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 PGS1Q32NB8 556 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 HSD17B12Q53GQ0 312 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 FAM47AQ5JRC9 791 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 PITRM1Q5JRX3 1037 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 RTP2Q5QGT7 225 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 C6orf52Q5T4I8 152 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 LGSNQ5TDP6 509 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 SEL1L2Q5TEA6 688 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ARL6IP4Q66PJ3 421 aaKnown RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 RINT1Q6NUQ1 792 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 CNNM4Q6P4Q7 775 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 DCUN1D2Q6PH85 259 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 LDHAL6AQ6ZMR3 332 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF782Q6ZMW2 699 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ANKS1BQ7Z6G8 1248 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 PRPF39Q86UA1 669 aaKnown RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 AACSQ86V21 672 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 CRLF3Q8IUI8 442 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 GPALPP1Q8IXQ4 340 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 RBFAQ8N0V3 343 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 CLEC4FQ8N1N0 589 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 SFRP1Q8N474 314 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 STX19Q8N4C7 294 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ANKRD13CQ8N6S4 541 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 FAM169BQ8N8A8 192 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 C12orf29Q8N999 325 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 LRRC57Q8N9N7 239 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 KDM1BQ8NB78 822 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 KYQ8NBH2 561 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 PCSK9Q8NBP7 692 aaKnown RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 TXNDC5Q8NBS9 432 aaKnown RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 LINC00116Q8NCU8 138 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 PSD4Q8NDX1 1056 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ABHD11Q8NFV4 315 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 OR52K1Q8NGK4 314 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 OR6F1Q8NGZ6 308 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 RHOXF1Q8NHV9 184 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZFAND1Q8TCF1 268 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 PHF10Q8WUB8 498 aaKnown RBP4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 LPGAT1Q92604 370 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 GTF2H4Q92759 462 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 PTP4A1Q93096 173 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms