RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 NR2F2P24468 414 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 MMP13P45452 471 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 CAPZA2P47755 286 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 ENTPD1P49961 510 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 PSMC6P62333 389 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 ROR2Q01974 943 aaKnown RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 TFCP2Q12800 502 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 SNTB1Q13884 538 aaKnown RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 SMN1Q16637 294 aaKnown RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 ZNF284Q2VY69 593 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 BMP2KLQ5H9B9 411 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 FAM122CQ6P4D5 195 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 TAOK1Q7L7X3 1001 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 CHST3Q7LGC8 479 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 SHFQ7M4L6 423 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 ZNF367Q7RTV3 350 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 LINC00346Q8IVM7 164 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 SCYL3Q8IZE3 742 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 SLC38A9Q8NBW4 561 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 MCUQ8NE86 351 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 C7orf57Q8NEG2 295 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 OR8K5Q8NH50 307 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 THAP6Q8TBB0 222 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 GPT2Q8TD30 523 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 NTN5Q8WTR8 489 aaPredicted RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 ZKSCAN4Q969J2 545 aaPredicted RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 TAAR8Q969N4 342 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 URB1-AS1Q96HZ7 61 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 ZMAT2Q96NC0 199 aaKnown RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 DGAT2Q96PD7 388 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 SRSF8Q9BRL6 282 aaKnown RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 RTN4RQ9BZR6 473 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 SPATC1LQ9H0A9 340 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 PPP1R3EQ9H7J1 279 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 C17orf75Q9HAS0 396 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 ZCCHC17Q9NP64 241 aaKnown RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 GPR108Q9NPR9 543 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 PIH1D3Q9NQM4 214 aaKnown RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 CCDC177Q9NQR7 707 aaPredicted RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 SH3GLB2Q9NR46 395 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 ACSS1Q9NUB1 689 aaPredicted RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 TAB2Q9NYJ8 693 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 CRNNQ9UBG3 495 aaPredicted RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 OR14J1Q9UGF5 321 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 AGO1Q9UL18 857 aaKnown RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 TTC7AQ9ULT0 858 aaPredicted RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 PLAGL1Q9UM63 463 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 COG5Q9UP83 839 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 ZNF148Q9UQR1 794 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 FRMD4BQ9Y2L6 1034 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 NME7Q9Y5B8 376 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 MAGED1Q9Y5V3 778 aaPredicted RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 SQORQ9Y6N5 450 aa3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 ASTN2O75129 1339 aaPredicted RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 ATXN2Q99700 1313 aaKnown RBP3.32□□□□□ -1.88
RNU6-390P-201ENST00000516259 TMEM272A0A1B0GTI8 110 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 TMEM8BA6NDV4 472 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 M0QZ24 198 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 VCYO14598 125 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 KCNN4O15554 427 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 HSPA12AO43301 675 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 ICAM1P05362 532 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 FYNP06241 537 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 APOA4P06727 396 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 MMP9P14780 707 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 TNFRSF1BP20333 461 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 UGT1A1P22309 533 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 HOXD3P31249 432 aaPredicted RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 MSH2P43246 934 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 KCNJ4P48050 445 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 ZNF41P51814 821 aaPredicted RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 HMGA2P52926 109 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 NUDT6P53370 316 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 P2RX3P56373 397 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 CSNK2A1P68400 391 aaPredicted RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 SRSF4Q08170 494 aaKnown RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 DSC1Q08554 894 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 SPOCK1Q08629 439 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 MAD2L1Q13257 205 aaPredicted RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 ALCAMQ13740 583 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 MVPQ14764 893 aaKnown RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 PTGR1Q14914 329 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 SRSF7Q16629 238 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 MYLK3Q32MK0 819 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 MTX3Q5HYI7 312 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 DCST1Q5T197 706 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 ZNF626Q68DY1 528 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 C8orf82Q6P1X6 216 aaPredicted RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 KCTD18Q6PI47 426 aaPredicted RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 SHC4Q6S5L8 630 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 APPL2Q8NEU8 664 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 CSNK2A3Q8NEV1 391 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 ARRDC2Q8TBH0 407 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 DNAAF4Q8WXU2 420 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 RPL36ALQ969Q0 106 aaKnown RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 ERGIC1Q969X5 290 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 NEK1Q96PY6 1258 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 SLC22A12Q96S37 553 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 ABHD1Q96SE0 405 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 HAUS8Q9BT25 410 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms