RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 CLCN6P51797 869 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 PGDP52209 483 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 AP3M2P53677 418 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 HDAC4P56524 1084 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SOX8P57073 446 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 CSNK1G2P78368 415 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 HMGN5P82970 282 aaKnown RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 CDK3Q00526 305 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SRSF2Q01130 221 aaKnown RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 PMP22Q01453 160 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SLC6A3Q01959 620 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 NRG1Q02297 640 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 PTSQ03393 145 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 DNM1Q05193 864 aaKnown RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 LTBQ06643 244 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ENPEPQ07075 957 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SLC20A2Q08357 652 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 NIPAL4Q0D2K0 466 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SLC10A7Q0GE19 358 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 TRAF2Q12933 501 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 NME3Q13232 169 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SGCGQ13326 291 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ADAM9Q13443 819 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 NFATC2Q13469 925 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 MTM1Q13496 603 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ART3Q13508 389 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 TRA2AQ13595 282 aaKnown RBP eCLIP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ATP1A4Q13733 1029 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SNTB1Q13884 538 aaKnown RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ARHGEF7Q14155 803 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ZNF235Q14590 738 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ELOCQ15369 112 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 GPR19Q15760 415 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ZIC1Q15915 447 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 C3AR1Q16581 482 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ZXDCQ2QGD7 858 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 C15orf59Q2T9L4 293 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SKOR2Q2VWA4 1001 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 PTCHD3Q3KNS1 767 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 CCDC14Q49A88 953 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 MAP9Q49MG5 647 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ZNF658BQ4V348 819 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ZRANB3Q5FWF4 1079 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 EMC4Q5J8M3 183 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 DCAF12Q5T6F0 453 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 TMCO4Q5TGY1 634 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 CEP135Q66GS9 1140 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 KRT39Q6A163 491 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 TXNRD3NBQ6F5E7 133 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ESRP1Q6NXG1 681 aaKnown RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 WDR74Q6RFH5 385 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 TMEM270Q6UE05 265 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 C6orf15Q6UXA7 325 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 CCDC73Q6ZRK6 1079 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 FAM83HQ6ZRV2 1179 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 COX15Q7KZN9 410 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 DPPA4Q7L190 304 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SLC26A9Q7LBE3 791 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 CXXC5Q7LFL8 322 aaKnown RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 LYSMD3Q7Z3D4 306 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SETD3Q86TU7 594 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 TTC7BQ86TV6 843 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 CDH24Q86UP0 819 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SLC47A2Q86VL8 602 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 FJX1Q86VR8 437 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ZNF227Q86WZ6 799 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 FAM131BQ86XD5 332 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 GKN2Q86XP6 184 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 FAM129CQ86XR2 697 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ZNF354CQ86Y25 554 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 DNAAF5Q86Y56 855 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 TGIF2LYQ8IUE0 185 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 TMTC1Q8IUR5 882 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 PASD1Q8IV76 773 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 LIX1LQ8IVB5 337 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SIAH3Q8IW03 269 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 FAM20CQ8IXL6 584 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 CCDC65Q8IXS2 484 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 DRC7Q8IY82 874 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 NRSN1Q8IZ57 195 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 DSELQ8IZU8 1212 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SLC34A3Q8N130 599 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 SIX6OS1Q8N1H7 587 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 RPRMLQ8N4K4 120 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 LZTR1Q8N653 840 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 LILRA3Q8N6C8 439 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 PCDH20Q8N6Y1 951 aaKnown RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 NPWQ8N729 165 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 EMC1Q8N766 993 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ENDOVQ8N8Q3 282 aaKnown RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ATP6V0D2Q8N8Y2 350 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 FAM184AQ8NB25 1140 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ZSCAN1Q8NBB4 408 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 EHBP1Q8NDI1 1231 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ST6GALNAC3Q8NDV1 305 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 FBXL13Q8NEE6 735 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 WFDC11Q8NEX6 87 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 ZNF397Q8NF99 534 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 OR6C4Q8NGE1 309 aa1.16□□□□□ -2.22
RNU4ATAC11P-201ENST00000515939 OR2AP1Q8NGE2 309 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms