RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 IRAK1BP1Q5VVH5 260 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 GGNBP1Q5YKI7 109 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 FAM72DQ6L9T8 149 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 QSOX2Q6ZRP7 698 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 FAM72BQ86X60 149 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 RNF113BQ8IZP6 322 aaKnown RBP3.79□□□□□ -1.8
LINC01088-211ENST00000515597 BBS10Q8TAM1 723 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 DUSP19Q8WTR2 217 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 HVCN1Q96D96 273 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 APOPT1Q96IL0 206 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 TBATAQ96M53 351 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 NDST4Q9H3R1 872 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 BRF2Q9HAW0 419 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 WASH6PQ9NQA3 447 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 DDX43Q9NXZ2 648 aaKnown RBP3.79□□□□□ -1.8
LINC01088-211ENST00000515597 KCND2Q9NZV8 630 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 PDP2Q9P2J9 529 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 GJD2Q9UKL4 321 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 RALYQ9UKM9 306 aaKnown RBP3.79□□□□□ -1.8
LINC01088-211ENST00000515597 PADI1Q9ULC6 663 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 ERVK-11Q9UQG0 969 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 TCF19Q9Y242 345 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 ABCC10Q5T3U5 1492 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 KDM6BO15054 1643 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 TARBP1Q13395 1621 aaKnown RBP3.78□□□□□ -1.8
LINC01088-211ENST00000515597 UTYO14607 1347 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 SPATA31D1Q6ZQQ2 1576 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 TSPAN4O14817 238 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 CREB3O43889 395 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 BDKRB2P30411 391 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 CORO1AP31146 461 aaKnown RBP3.78□□□□□ -1.8
LINC01088-211ENST00000515597 CDKN1AP38936 164 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 ARL1P40616 181 aaPredicted RBP3.78□□□□□ -1.8
LINC01088-211ENST00000515597 GALNT2Q10471 571 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 SLC9B1Q4ZJI4 515 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 HIST2H2BDQ6DRA6 164 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 DGLUCYQ7Z3D6 616 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 ESX1Q8N693 406 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 METTL27Q8N6F8 245 aaPredicted RBP3.78□□□□□ -1.8
LINC01088-211ENST00000515597 KLHL29Q96CT2 875 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 ZNF501Q96CX3 271 aaPredicted RBP3.78□□□□□ -1.8
LINC01088-211ENST00000515597 PABPC5Q96DU9 382 aaKnown RBP3.78□□□□□ -1.8
LINC01088-211ENST00000515597 MPHOSPH8Q99549 860 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 VEZTQ9HBM0 779 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 GGA3Q9NZ52 723 aa3.78□□□□□ -1.8
LINC01088-211ENST00000515597 USP17L23D6RBM5 183 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 MYOD1P15172 320 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 CDAP32320 146 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 PAFAH1B1P43034 410 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 FASLGP48023 281 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 FMO5P49326 533 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 SORDQ00796 357 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 PTP4A2Q12974 167 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 C6orf141Q5SZD1 244 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 KRTAP7-1Q8IUC3 87 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 DMBX1Q8NFW5 382 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 HTRA1Q92743 480 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 CMKLR1Q99788 373 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 LRRC1Q9BTT6 524 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 IFIH1Q9BYX4 1025 aaKnown RBP3.77□□□□□ -1.81
LINC01088-211ENST00000515597 FKRPQ9H9S5 495 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 TAAR2Q9P1P5 351 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 LOXL2Q9Y4K0 774 aa3.77□□□□□ -1.81
LINC01088-211ENST00000515597 TDRD9Q8NDG6 1382 aaKnown RBP3.76□□□□□ -1.81
LINC01088-211ENST00000515597 TOPBP1Q92547 1522 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 RAD54L2Q9Y4B4 1467 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 TTC36A6NLP5 189 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 CAPN9O14815 690 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 GNL1P36915 607 aaPredicted RBP3.76□□□□□ -1.81
LINC01088-211ENST00000515597 GNAQP50148 359 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 PDE1BQ01064 536 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 USP41Q3LFD5 358 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 ALFQ53S48 1182 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 GPATCH4Q5T3I0 446 aaKnown RBP3.76□□□□□ -1.81
LINC01088-211ENST00000515597 FRG2Q64ET8 278 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 SLC46A3Q7Z3Q1 461 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 MYPOPQ86VE0 399 aaPredicted RBP3.76□□□□□ -1.81
LINC01088-211ENST00000515597 SPEM1Q8N4L4 309 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 SLC24A4Q8NFF2 622 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 MTERF1Q99551 399 aaKnown RBP3.76□□□□□ -1.81
LINC01088-211ENST00000515597 SYT17Q9BSW7 474 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 PGAP2Q9UHJ9 254 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 SARDHQ9UL12 918 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 DLGAP4Q9Y2H0 992 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 CRYL1Q9Y2S2 319 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 CEPT1Q9Y6K0 416 aa3.76□□□□□ -1.81
LINC01088-211ENST00000515597 SNAPC4Q5SXM2 1469 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 TNFSF14O43557 240 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 WDR1O75083 606 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 ABCD1P33897 745 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 CPOXP36551 454 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 ZNF234Q14588 700 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 ALG11Q2TAA5 492 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 STXBP5Q5T5C0 1151 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 ZNF280DQ6N043 979 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 DUS1LQ6P1R4 473 aaKnown RBP3.75□□□□□ -1.81
LINC01088-211ENST00000515597 BRAT1Q6PJG6 821 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 PQLC2Q6ZP29 291 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 ASB18Q6ZVZ8 466 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 HAPLN4Q86UW8 402 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms