RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 NFIL3Q16649 462 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 C1QTNF12Q5T7M4 302 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 LRCH2Q5VUJ6 765 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 FAM198BQ6UWH4 519 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CYB5R4Q7L1T6 521 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 MMABQ96EY8 250 aaPredicted RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ESRP2Q9H6T0 727 aaKnown RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 MVB12BQ9H7P6 319 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 MMP25Q9NPA2 562 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ARL8BQ9NVJ2 186 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 POLG2Q9UHN1 485 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 PCDHGB5Q9Y5G0 923 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 KCNE2Q9Y6J6 123 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 PCSK5Q92824 1860 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 LTN1O94822 1766 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 EIF3AQ14152 1382 aaKnown RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 PRSS47A8MTI9 375 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 MS4A18H0YCH9 400 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 LIASO43766 372 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 STRNO43815 780 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ZNF500O60304 480 aaPredicted RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 FTCDO95954 541 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 PTMSP20962 102 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ACSL1P33121 698 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 KRT83P78385 493 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 POU5F1Q01860 360 aaKnown RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ROR2Q01974 943 aaKnown RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 TRAF2Q12933 501 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 NAA25Q14CX7 972 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 SMTNL2Q2TAL5 461 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CEP78Q5JTW2 689 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ZNF280DQ6N043 979 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 SLC18B1Q6NT16 456 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CAMK1DQ8IU85 385 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 AGBL3Q8NEM8 1001 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 INPP5DQ92835 1189 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 TMEM18Q96B42 140 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 PHF21BQ96EK2 531 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ZNF830Q96NB3 372 aaPredicted RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 EFHD1Q9BUP0 239 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 TMEM51Q9NW97 253 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 GDE1Q9NZC3 331 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 EHD2Q9NZN4 543 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 DHDHQ9UQ10 334 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ASH1LQ9NR48 2969 aaKnown RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CUBNO60494 3623 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 FER1L6Q2WGJ9 1857 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 SCN11AQ9UI33 1791 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 LCATP04180 440 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 AMTP48728 403 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 SPOCK1Q08629 439 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 DECR1Q16698 335 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 SOWAHAQ2M3V2 549 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CRY2Q49AN0 593 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ESCO2Q56NI9 601 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 KLHL24Q6TFL4 600 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 RRM2BQ7LG56 351 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 SLC46A3Q7Z3Q1 461 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 MAATS1Q7Z4T9 603 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CHERPQ8IWX8 916 aaKnown RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CLIP4Q8N3C7 705 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 PNLDC1Q8NA58 520 aaKnown RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 RBM15BQ8NDT2 890 aaKnown RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ERP27Q96DN0 273 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 LRFN5Q96NI6 719 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 KCNN2Q9H2S1 579 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 CXorf56Q9H5V9 222 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 PLAC1Q9HBJ0 212 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 DDX4Q9NQI0 724 aaKnown RBP1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 TMEM30AQ9NV96 361 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 SELENONQ9NZV5 590 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ZNHIT2Q9UHR6 403 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 ST3GAL5Q9UNP4 418 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 SNX8Q9Y5X2 465 aa1.73□□□□□ -2.13
AC025539.1-201ENST00000515343 BPTFQ12830 3046 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 VILLO15195 856 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 SMAD9O15198 467 aaKnown RBP1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 DOK2O60496 412 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 MITFO75030 526 aaPredicted RBP1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 HOXB2P14652 356 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 HSD17B4P51659 736 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 ARF3P61204 181 aaPredicted RBP1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 ARF1P84077 181 aaKnown RBP1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 PDCLQ13371 301 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 CDC37Q16543 378 aaPredicted RBP1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 P3H1Q32P28 736 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 FBXO43Q4G163 708 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 CXorf66Q5JRM2 361 aaPredicted RBP1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 FAM69AQ5T7M9 428 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 FRG2Q64ET8 278 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 METTL2BQ6P1Q9 378 aaKnown RBP1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 TPRG1Q6ZUI0 275 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 TECPR1Q7Z6L1 1165 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 PAPD5Q8NDF8 572 aaKnown RBP1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 BBS10Q8TAM1 723 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 METTL2AQ96IZ6 378 aaKnown RBP1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 KLHL15Q96M94 604 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 SEZ6LQ9BYH1 1024 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 PRO3102Q9H379 93 aa1.72□□□□□ -2.13
AC025539.1-201ENST00000515343 ARL15Q9NXU5 204 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms