RNA–Protein interactions for RNA: ENST00000515127.1

AC004053.1-201, humanhuman

TSL 5 BASIC

Gene AC004053.1, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004053.1-201ENST00000515127 GSDMBQ8TAX9 411 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 ETNPPLQ8TBG4 499 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 ELP5Q8TE02 316 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 FAM216AQ8WUB2 273 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 HDAC2Q92769 488 aaKnown RBP3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 SKA1Q96BD8 255 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 INTS12Q96CB8 462 aaKnown RBP3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 THOC1Q96FV9 657 aaKnown RBP3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 BICD1Q96G01 975 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 NTPCRQ9BSD7 190 aaKnown RBP3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 TCHPQ9BT92 498 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 MAK16Q9BXY0 300 aaKnown RBP3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 MUC13Q9H3R2 512 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 SH3GLB2Q9NR46 395 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 SLC6A13Q9NSD5 602 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 CISD1Q9NZ45 108 aaKnown RBP3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 SPATA7Q9P0W8 599 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 ORC3Q9UBD5 711 aaPredicted RBP3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 AASSQ9UDR5 926 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 RSPH14Q9UHP6 348 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 CFAP45Q9UL16 551 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 NOSIPQ9Y314 301 aaKnown RBP3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 RABGAP1Q9Y3P9 1069 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 ITIH6Q6UXX5 1313 aa3.35□□□□□ -1.87
AC004053.1-201ENST00000515127 KAT6BQ8WYB5 2073 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 A6NCN8 305 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 TMEM202A6NGA9 273 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 SRRM3A6NNA2 597 aaPredicted RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 BCAT2O15382 392 aaPredicted RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 KIAA0754O94854 1291 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 FTCDO95954 541 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 NGFRP08138 427 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 LAMP2P13473 410 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 CHMP24386 653 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 PIGAP37287 484 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 PCYT1AP49585 367 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 CSE1LP55060 971 aaKnown RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 SH3BGRP55822 239 aaPredicted RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 RPS3AP61247 264 aaKnown RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 LTBQ06643 244 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 TMEM115Q12893 351 aaPredicted RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 OLIG2Q13516 323 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 DCTN2Q13561 401 aaKnown RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 ERV3-1Q14264 604 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 SLMAPQ14BN4 828 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 WTAPQ15007 396 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 RASA2Q15283 850 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 CCNG2Q16589 344 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 CLPPQ16740 277 aaPredicted RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 KRT24Q2M2I5 525 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 USP41Q3LFD5 358 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 SOWAHCQ53LP3 525 aaPredicted RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 FAM133BQ5BKY9 247 aaKnown RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 C6orf141Q5SZD1 244 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 CFAP58Q5T655 872 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 HHATQ5VTY9 493 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 SNX30Q5VWJ9 437 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 TTC19Q6DKK2 380 aaPredicted RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 HIST2H2BCQ6DN03 193 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 HIST2H2BDQ6DRA6 164 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 FBXO46Q6PJ61 603 aaPredicted RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 LCTLQ6UWM7 567 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 RSRC2Q7L4I2 434 aaKnown RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 MAATS1Q7Z4T9 603 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 PXKQ7Z7A4 578 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 TMEM110Q86TL2 294 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 RBM23Q86U06 439 aaKnown RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 FOXRED2Q8IWF2 684 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 SLC7A5P1Q8MH63 180 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 CNTROBQ8N137 903 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 FBXL14Q8N1E6 418 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 ZCCHC9Q8N567 271 aaKnown RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 DCLK2Q8N568 766 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 ZBTB2Q8N680 514 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 TMEM116Q8NCL8 245 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 OR14A16Q8NHC5 309 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 KCNG4Q8TDN1 519 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 ZNF75CPQ92670 426 aaPredicted RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 SNX21Q969T3 373 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 FAM149B1Q96BN6 582 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 TMEM204Q9BSN7 226 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 HAUS8Q9BT25 410 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 C1QTNF5Q9BXJ0 243 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 PLEKHA5Q9HAU0 1116 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 BPIFA1Q9NP55 256 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 LTB4R2Q9NPC1 389 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 TCF7L2Q9NQB0 619 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 OLA1Q9NTK5 396 aaKnown RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 PSD3Q9NYI0 1048 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 CWC15Q9P013 229 aaKnown RBP3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 HAO1Q9UJM8 370 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 MKLN1Q9UL63 735 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 ADAM18Q9Y3Q7 739 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 PSAT1Q9Y617 370 aa3.34□□□□□ -1.87
AC004053.1-201ENST00000515127 BAZ1BQ9UIG0 1483 aaKnown RBP3.34□□□□□ -1.88
AC004053.1-201ENST00000515127 PGPEP1LA6NFU8 196 aa3.33□□□□□ -1.88
AC004053.1-201ENST00000515127 GAGE7O76087 117 aa3.33□□□□□ -1.88
AC004053.1-201ENST00000515127 SCGB1D1O95968 90 aa3.33□□□□□ -1.88
AC004053.1-201ENST00000515127 GAGE12FP0CL80 117 aa3.33□□□□□ -1.88
AC004053.1-201ENST00000515127 GAGE12GP0CL81 117 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms