RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PIRTP0C851 137 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 AK4P27144 223 aaPredicted RBP24.35■■□□□ 1.49
SNF8-213ENST00000514929 CTNNA1P35221 906 aaKnown RBP24.35■■□□□ 1.49
SNF8-213ENST00000514929 LSSP48449 732 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 CCL7P80098 99 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 CTBSQ01459 385 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 WASHC5Q12768 1159 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 COL28A1Q2UY09 1125 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 C3orf38Q5JPI3 329 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 CCDC181Q5TID7 509 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 SLC30A9Q6PML9 568 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 KIAA1328Q86T90 577 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 NRROSQ86YC3 692 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 COX14Q96I36 57 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 OR2M4Q96R27 311 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 GFM1Q96RP9 751 aaKnown RBP24.35■■□□□ 1.49
SNF8-213ENST00000514929 UBP1Q9NZI7 540 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 TAAR2Q9P1P5 351 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 KLHL8Q9P2G9 620 aaPredicted RBP24.35■■□□□ 1.49
SNF8-213ENST00000514929 LRIT1Q9P2V4 623 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 SHOC2Q9UQ13 582 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 PCDHA3Q9Y5H8 950 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 COL27A1Q8IZC6 1860 aaPredicted RBP24.34■■□□□ 1.49
SNF8-213ENST00000514929 BTNL10A8MVZ5 291 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 RRP8O43159 456 aaKnown RBP24.34■■□□□ 1.49
SNF8-213ENST00000514929 NDST3O95803 873 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 SLC4A1P02730 911 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 NFKB1P19838 968 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 VAV2P52735 878 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 COPS2P61201 443 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 PEX6Q13608 980 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 HLTFQ14527 1009 aaKnown RBP eCLIP24.34■■□□□ 1.49
SNF8-213ENST00000514929 TBC1D25Q3MII6 688 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 HENMT1Q5T8I9 393 aaKnown RBP24.34■■□□□ 1.49
SNF8-213ENST00000514929 LRRC69Q6ZNQ3 347 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 BBS12Q6ZW61 710 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 CCNJLQ8IV13 435 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 Q8N9G6 341 aaPredicted RBP24.34■■□□□ 1.49
SNF8-213ENST00000514929 SNIP1Q8TAD8 396 aaKnown RBP24.34■■□□□ 1.49
SNF8-213ENST00000514929 ZDHHC1Q8WTX9 485 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 SCARF2Q96GP6 870 aaPredicted RBP24.34■■□□□ 1.49
SNF8-213ENST00000514929 WDR24Q96S15 920 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 GPR63Q9BZJ6 419 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 LACRTQ9GZZ8 138 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 LRRN3Q9H3W5 708 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 MAGEE1Q9HCI5 957 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 APPL1Q9UKG1 709 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 SATB2Q9UPW6 733 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 RNF215Q9Y6U7 377 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 URB1O60287 2271 aaKnown RBP24.34■■□□□ 1.49
SNF8-213ENST00000514929 CELSR3Q9NYQ7 3312 aa24.34■■□□□ 1.49
SNF8-213ENST00000514929 HACD1B0YJ81 288 aa24.33■■□□□ 1.49
SNF8-213ENST00000514929 FGF1P05230 155 aa24.33■■□□□ 1.49
SNF8-213ENST00000514929 PNLIPP16233 465 aa24.33■■□□□ 1.49
SNF8-213ENST00000514929 CD68P34810 354 aaPredicted RBP24.33■■□□□ 1.49
SNF8-213ENST00000514929 EIF2S3P41091 472 aaKnown RBP24.33■■□□□ 1.49
SNF8-213ENST00000514929 PID1Q7Z2X4 250 aa24.33■■□□□ 1.49
SNF8-213ENST00000514929 GALNT13Q8IUC8 556 aa24.33■■□□□ 1.49
SNF8-213ENST00000514929 HTR3CQ8WXA8 447 aa24.33■■□□□ 1.49
SNF8-213ENST00000514929 QKIQ96PU8 341 aaKnown RBP eCLIP24.33■■□□□ 1.49
SNF8-213ENST00000514929 VAT1Q99536 393 aa24.33■■□□□ 1.49
SNF8-213ENST00000514929 ZNF711Q9Y462 761 aa24.33■■□□□ 1.49
SNF8-213ENST00000514929 ADAMTS20P59510 1910 aa24.33■■□□□ 1.49
SNF8-213ENST00000514929 A0A1W2PQM1 296 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 CCDC66A2RUB6 948 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 FADS2P1A8MWK0 482 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 APOC4-APOC2K7ER74 178 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 NUDT21O43809 227 aaKnown RBP24.32■■□□□ 1.48
SNF8-213ENST00000514929 APOC2P02655 101 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 ATP1A1P05023 1023 aaKnown RBP24.32■■□□□ 1.48
SNF8-213ENST00000514929 ACTR1BP42025 376 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 TNNT3P45378 269 aaPredicted RBP24.32■■□□□ 1.48
SNF8-213ENST00000514929 PDX1P52945 283 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 MAZP56270 477 aaKnown RBP24.32■■□□□ 1.48
SNF8-213ENST00000514929 ACTR1AP61163 376 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 BIRC2Q13490 618 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 PYCR3Q53H96 274 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 ALS2CLQ60I27 953 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 FOXR1Q6PIV2 292 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 SPC24Q8NBT2 197 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 EID2BQ96D98 161 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 ZNF578Q96N58 590 aaPredicted RBP24.32■■□□□ 1.48
SNF8-213ENST00000514929 SRPK1Q96SB4 655 aaKnown RBP24.32■■□□□ 1.48
SNF8-213ENST00000514929 RAD18Q9NS91 495 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 IMPACTQ9P2X3 320 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 FAM153AQ9UHL3 310 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 PLEKHM1Q9Y4G2 1056 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 ST14Q9Y5Y6 855 aa24.32■■□□□ 1.48
SNF8-213ENST00000514929 LAMA5O15230 3695 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 MACROD2A1Z1Q3 448 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 D6RAR5 112 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 H7C0C1 242 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 PJA2O43164 708 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 DXOO77932 396 aaKnown RBP24.31■■□□□ 1.48
SNF8-213ENST00000514929 CTNNA2P26232 953 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 RBMS1P29558 406 aaKnown RBP24.31■■□□□ 1.48
SNF8-213ENST00000514929 CETN2P41208 172 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 ABCG1P45844 678 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 ATP5OP48047 213 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 TMC3Q7Z5M5 1100 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms