RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 STRADBQ9C0K7 418 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 BRD8Q9H0E9 1235 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 EPB41L5Q9HCM4 733 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 PKD2L2Q9NZM6 624 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 SSUH2Q9Y2M2 353 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 TMEM98Q9Y2Y6 226 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 HYOU1Q9Y4L1 999 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 ACACAQ13085 2346 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 RGSL1A5PLK6 1076 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 DNAJC6O75061 913 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 ECEL1O95672 775 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 UGT1A5P35504 534 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 ACTR1BP42025 376 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 NOP2P46087 812 aaKnown RBP10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 NR2C2P49116 596 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 SPINT3P49223 89 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 UCNP55089 124 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 ACTR1AP61163 376 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 DYNLT1P63172 113 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 ZFP36L1Q07352 338 aaKnown RBP10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 PEX6Q13608 980 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 LRP8Q14114 963 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 GALNT3Q14435 633 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 PYCR3Q53H96 274 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 FAM182AQ5T1J6 154 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 C11orf63Q6NUN7 778 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 FOXR1Q6PIV2 292 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 RAB11FIP2Q7L804 512 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 LYSMD3Q7Z3D4 306 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 TMPRSS9Q7Z410 1059 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 NT5DC3Q86UY8 548 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 GALNT13Q8IUC8 556 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 SLITRK4Q8IW52 837 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 NAGSQ8N159 534 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 EID2BQ96D98 161 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 NAF1Q96HR8 494 aaKnown RBP10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 MLPHQ9BV36 600 aaPredicted RBP10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 TRIM5Q9C035 493 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 SLC25A51Q9H1U9 297 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 SEPT10Q9P0V9 454 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 VPS18Q9P253 973 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 NFKBIL1Q9UBC1 381 aaPredicted RBP10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 ATXN7L1Q9ULK2 861 aaPredicted RBP10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 CNOT6Q9ULM6 557 aaKnown RBP10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 PLEKHM1Q9Y4G2 1056 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 PCDHGA7Q9Y5G6 932 aa10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 OAS3Q9Y6K5 1087 aaKnown RBP10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 GOLGA4Q13439 2230 aaKnown RBP10.39□□□□□ -0.75
HMGXB3-205ENST00000514469 A0A0A6YYK5 440 aaPredicted RBP10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 RHPN2P1A8MT19 583 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 FADS2P1A8MWK0 482 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 INPP4BO15327 924 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 TNFSF15O95150 251 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 TNNT1P13805 278 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 PECAM1P16284 738 aaPredicted RBP10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 PTPN3P26045 913 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 MAGEA1P43355 309 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 TMPRSS3P57727 454 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 DCDC1P59894 354 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 CXADRP78310 365 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 CDK18Q07002 472 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 ADCY2Q08462 1091 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 TFDP2Q14188 446 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 CLPPQ16740 277 aaPredicted RBP10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 MAP9Q49MG5 647 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 TEX44Q53QW1 395 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 ODF2Q5BJF6 829 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 BROXQ5VW32 411 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 SPOCD1Q6ZMY3 1216 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 B4GALNT4Q76KP1 1039 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 MARK2Q7KZI7 788 aaKnown RBP10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 CCDC170Q8IYT3 715 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 KATNAL2Q8IYT4 538 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 FBXO39Q8N4B4 442 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 CCHCR1Q8TD31 782 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 PATE1Q8WXA2 126 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 TMEM159Q96B96 161 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 CCDC97Q96F63 343 aaPredicted RBP10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 AGAP3Q96P47 875 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 GOLPH3Q9H4A6 298 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 FAM83DQ9H4H8 585 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 GLOD4Q9HC38 313 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 ACSL6Q9UKU0 697 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 LOXL2Q9Y4K0 774 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 PCYT1BQ9Y5K3 369 aaPredicted RBP10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 ALG6Q9Y672 507 aa10.38□□□□□ -0.75
HMGXB3-205ENST00000514469 hCG_1818297A0A087WSY0 165 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 TEX51A0A1B0GUA7 166 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 ATXN7O15265 892 aaPredicted RBP10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 KLK10O43240 276 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 B4GAT1O43505 415 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 CST8O60676 142 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 CPNE6O95741 557 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 MT-CYBP00156 380 aaPredicted RBP10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 ATP1A1P05023 1023 aaKnown RBP10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 HGFP14210 728 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 FECHP22830 423 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 CYLC1P35663 651 aaPredicted RBP10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 GPR3P46089 330 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 FASLGP48023 281 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms