RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 OXR1Q8N573 874 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 OR2I1PQ8NGU4 316 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 TADA1Q96BN2 335 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 RMDN1Q96DB5 314 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 IFT43Q96FT9 208 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 MCCC1Q96RQ3 725 aaPredicted RBP8.32□□□□□ -1.08
CCL28-204ENST00000514421 ELF4Q99607 663 aaPredicted RBP8.32□□□□□ -1.08
CCL28-204ENST00000514421 MYOCQ99972 504 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 MLPHQ9BV36 600 aaPredicted RBP8.32□□□□□ -1.08
CCL28-204ENST00000514421 ADGRE3Q9BY15 652 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 STMN4Q9H169 189 aaPredicted RBP8.32□□□□□ -1.08
CCL28-204ENST00000514421 LRRC4CQ9HCJ2 640 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 FZD3Q9NPG1 666 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 MBNL1Q9NR56 388 aaKnown RBP8.32□□□□□ -1.08
CCL28-204ENST00000514421 TM7SF3Q9NS93 570 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 PAK5Q9P286 719 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 PCDHGB2Q9Y5G2 931 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 CFAP54Q96N23 3096 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 A0A1B0GTQ1 180 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 LOC285095A0A1B0GVY8 99 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 H0Y8X5 98 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 PSMD11O00231 422 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 RASGRF2O14827 1237 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 KCNN4O15554 427 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 PMPCBO75439 489 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 ANXA9O76027 345 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 MT-CYBP00156 380 aaPredicted RBP8.31□□□□□ -1.08
CCL28-204ENST00000514421 ALPIP09923 528 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 NFKB1P19838 968 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 ACTN2P35609 894 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 MAGEA3P43357 314 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 ARRB1P49407 418 aaPredicted RBP8.31□□□□□ -1.08
CCL28-204ENST00000514421 VPS41P49754 854 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 CDK16Q00536 496 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 PTSQ03393 145 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 MPP3Q13368 585 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 PTK2BQ14289 1009 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 PRPSAP1Q14558 356 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 CNGA3Q16281 694 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 HIF1AQ16665 826 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 KYNUQ16719 465 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 QPCTQ16769 361 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 PARP6Q2NL67 630 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 GLIPR1L2Q4G1C9 344 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 ANKRD20A2Q5SQ80 823 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 ANKRD20A1Q5TYW2 823 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 ANKRD20A3Q5VUR7 823 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 KCTD16Q68DU8 428 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 ITPRIPL1Q6GPH6 555 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 CRTC1Q6UUV9 634 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 LAYNQ6UX15 382 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 KYAT3Q6YP21 454 aaKnown RBP8.31□□□□□ -1.08
CCL28-204ENST00000514421 PPP1R21Q6ZMI0 780 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 CENPUQ71F23 418 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 KDELC2Q7Z4H8 507 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 PRUNE1Q86TP1 453 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 SPATS2Q86XZ4 545 aaKnown RBP8.31□□□□□ -1.08
CCL28-204ENST00000514421 FAM71DQ8N9W8 422 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 TP53I13Q8NBR0 393 aaPredicted RBP8.31□□□□□ -1.08
CCL28-204ENST00000514421 MCUQ8NE86 351 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 LPCAT1Q8NF37 534 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 OR13H1Q8NG92 308 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 SPATA22Q8NHS9 363 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 COQ10AQ96MF6 247 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 LYSMD1Q96S90 227 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 SRPK1Q96SB4 655 aaKnown RBP8.31□□□□□ -1.08
CCL28-204ENST00000514421 CAPS2Q9BXY5 557 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 CNOT10Q9H9A5 744 aaKnown RBP8.31□□□□□ -1.08
CCL28-204ENST00000514421 IL21RQ9HBE5 538 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 COQ6Q9Y2Z9 468 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 ACTL7BQ9Y614 415 aa8.31□□□□□ -1.08
CCL28-204ENST00000514421 KNTC1P50748 2209 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 NYNRINQ9P2P1 1898 aaKnown RBP8.3□□□□□ -1.08
CCL28-204ENST00000514421 DOCK9Q9BZ29 2069 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 A0A087WUV0 522 aaPredicted RBP8.3□□□□□ -1.08
CCL28-204ENST00000514421 SPTY2D1-AS1A0A0U1RR47 76 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 DCDC2BA2VCK2 349 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 RGSL1A5PLK6 1076 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 NPIPB15A6NHN6 443 aaPredicted RBP8.3□□□□□ -1.08
CCL28-204ENST00000514421 GOLGA8CPA6NN73 597 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 E7EVH7 732 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 YKT6O15498 198 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 PCDHGA12O60330 932 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 CDH16O75309 829 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 FAM155BO75949 473 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 TMEM63AO94886 807 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 CLDN7O95471 211 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 NDST3O95803 873 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 IFNB1P01574 187 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 IVLP07476 585 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 HOXC4P09017 264 aaPredicted RBP8.3□□□□□ -1.08
CCL28-204ENST00000514421 CD59P13987 128 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 ZNF30P17039 623 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 GM2AP17900 193 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 TPSB2P20231 275 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 CSRP1P21291 193 aaKnown RBP8.3□□□□□ -1.08
CCL28-204ENST00000514421 TRIM23P36406 574 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 MDH1P40925 334 aaKnown RBP8.3□□□□□ -1.08
CCL28-204ENST00000514421 CCT8P50990 548 aa8.3□□□□□ -1.08
CCL28-204ENST00000514421 THOP1P52888 689 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms