RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 FSD1LQ9BXM9 530 aa9.47□□□□□ -0.89
SNF8-211ENST00000512243 TDRD1Q9BXT4 1180 aaKnown RBP9.47□□□□□ -0.89
SNF8-211ENST00000512243 TPSD1Q9BZJ3 242 aa9.47□□□□□ -0.89
SNF8-211ENST00000512243 VPS45Q9NRW7 570 aa9.47□□□□□ -0.89
SNF8-211ENST00000512243 FBXL12Q9NXK8 326 aa9.47□□□□□ -0.89
SNF8-211ENST00000512243 UBP1Q9NZI7 540 aa9.47□□□□□ -0.89
SNF8-211ENST00000512243 DKK3Q9UBP4 350 aa9.47□□□□□ -0.89
SNF8-211ENST00000512243 EBF1Q9UH73 591 aa9.47□□□□□ -0.89
SNF8-211ENST00000512243 ASIC3Q9UHC3 531 aa9.47□□□□□ -0.89
SNF8-211ENST00000512243 FBXO4Q9UKT5 387 aa9.47□□□□□ -0.89
SNF8-211ENST00000512243 NCKAP1Q9Y2A7 1128 aa9.47□□□□□ -0.89
SNF8-211ENST00000512243 AAR2Q9Y312 384 aaKnown RBP9.47□□□□□ -0.89
SNF8-211ENST00000512243 GON4LQ3T8J9 2241 aa9.47□□□□□ -0.89
SNF8-211ENST00000512243 SDK1Q7Z5N4 2213 aa9.46□□□□□ -0.89
SNF8-211ENST00000512243 TSPAN11A1L157 253 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 C16orf96A6NNT2 1141 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 UPK3BL1B0FP48 263 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 UPK3BL2E5RIL1 263 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 E7EVH7 732 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 TRAFD1O14545 582 aaPredicted RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 PSMD3O43242 534 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 ZNF217O75362 1048 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 RNASEH2AO75792 299 aaKnown RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 PGLSO95336 258 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 MT-CYBP00156 380 aaPredicted RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 RNASE1P07998 156 aaKnown RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 ZSCAN5DPP0CG00 497 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 TDGF1P13385 188 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 HOXA6P31267 233 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 RPL22P35268 128 aaKnown RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 DRD3P35462 400 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 P2RY2P41231 377 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 PXNP49023 591 aaPredicted RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 LMAN1P49257 510 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 METAP1P53582 386 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 EPHB1P54762 984 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 WNT3AP56704 352 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 BASP1P80723 227 aaKnown RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 CNTN1Q12860 1018 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 GPS1Q13098 491 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 PTK6Q13882 451 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 ANGPT1Q15389 498 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 NKPD1Q17RQ9 610 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 FAXCQ5TGI0 409 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 FBXL19Q6PCT2 694 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 TSSK4Q6SA08 328 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 KDELC1Q6UW63 502 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 USP30Q70CQ3 517 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 ERN2Q76MJ5 926 aaKnown RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 MAATS1Q7Z4T9 603 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 PRUNE1Q86TP1 453 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 PRPF39Q86UA1 669 aaKnown RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 WDR5BQ86VZ2 330 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 JAMLQ86YT9 394 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 NDUFAF2Q8N183 169 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 TAB3Q8N5C8 712 aaPredicted RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 AADATQ8N5Z0 425 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 GLIS1Q8NBF1 620 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 LPCAT1Q8NF37 534 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 IPMKQ8NFU5 416 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 HCAR2Q8TDS4 363 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 SLCO2A1Q92959 643 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 TADA1Q96BN2 335 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 OXNAD1Q96HP4 312 aaPredicted RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 NSMCE3Q96MG7 304 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 FICDQ9BVA6 458 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 HDAC8Q9BY41 377 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 LRRC40Q9H9A6 602 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 MBNL3Q9NUK0 354 aaKnown RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 USP36Q9P275 1121 aaKnown RBP9.46□□□□□ -0.9
SNF8-211ENST00000512243 FZD4Q9ULV1 537 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 CHKBQ9Y259 395 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 PLXNA2O75051 1894 aa9.46□□□□□ -0.9
SNF8-211ENST00000512243 TP53BP1Q12888 1972 aaPredicted RBP9.45□□□□□ -0.9
SNF8-211ENST00000512243 CCDC163A0A0D9SF12 145 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 PLK4O00444 970 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 TTI1O43156 1089 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 SLC7A4O43246 635 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 METTL18O95568 372 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 NDST3O95803 873 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 ADRB3P13945 408 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 OXTRP30559 389 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 FNTBP49356 437 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 TPMTP51580 245 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 SUOXP51687 545 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 RPL26P61254 145 aaKnown RBP9.45□□□□□ -0.9
SNF8-211ENST00000512243 POLR2LP62875 67 aaKnown RBP9.45□□□□□ -0.9
SNF8-211ENST00000512243 DAB2P98082 770 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 CDK18Q07002 472 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 DMWDQ09019 674 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 SEMA5AQ13591 1074 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 USP39Q53GS9 565 aaKnown RBP9.45□□□□□ -0.9
SNF8-211ENST00000512243 PIP5KL1Q5T9C9 394 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 AGBL4Q5VU57 503 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 CCDC70Q6NSX1 233 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 C8orf74Q6P047 294 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 ERAP2Q6P179 960 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.45□□□□□ -0.9
SNF8-211ENST00000512243 USP45Q70EL2 814 aa9.45□□□□□ -0.9
SNF8-211ENST00000512243 FAM124AQ86V42 546 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms