RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ANP32CO43423 234 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 ASNSP08243 561 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 FCGR2AP12318 317 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 PRF1P14222 555 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 GJC1P36383 396 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 MTNR1AP48039 350 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 NRIP1P48552 1158 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 TUBP50607 506 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 LINC00205P59089 165 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 CSTF1Q05048 431 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 TBL3Q12788 808 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 TDGQ13569 410 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 BYSLQ13895 437 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 SH2D4BQ5SQS7 431 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 PIK3CD-AS1Q5SR53 167 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 TTC39AQ5SRH9 613 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 INTS11Q5TA45 600 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 KIAA1161Q6NSJ0 714 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 GJB7Q6PEY0 223 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 ZNF793Q6ZN11 406 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 DDIASQ8IXT1 998 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 MYOCDQ8IZQ8 938 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 ESX1Q8N693 406 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 TMEM217Q8N7C4 229 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 AFAP1L1Q8TED9 768 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 NCSTNQ92542 709 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 HTRA1Q92743 480 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 STAMQ92783 540 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 HVCN1Q96D96 273 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 LYZL4Q96KX0 146 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 NECTIN4Q96NY8 510 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 IDI2Q9BXS1 227 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 GPR63Q9BZJ6 419 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 SPATC1LQ9H0A9 340 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 ZNF304Q9HCX3 659 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 SPAG4Q9NPE6 437 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 GPR108Q9NPR9 543 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 THSD1Q9NS62 852 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 DLGAP2Q9P1A6 1054 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 HDAC6Q9UBN7 1215 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 UPB1Q9UBR1 384 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 ZNF69Q9UC07 566 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 ATG2AQ2TAZ0 1938 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 FAM90A8PA6NJQ4 464 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 CD8B2A6NJW9 211 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 FAM90A7PA6NKC0 464 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 FAM90A22PA8MWA6 464 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 FAM90A12PA8MX19 464 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 FAM90A23PA8MXZ1 464 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 ZNF814B7Z6K7 855 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 PEX12O00623 359 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 WDR46O15213 610 aaKnown RBP3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 WEE2P0C1S8 567 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 FAM90A13PP0C7W8 464 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 FAM90A24PP0C7X0 464 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 XBP1P17861 261 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 CIITAP33076 1130 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 HNF1BP35680 557 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 GYG1P46976 350 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 CSRP3P50461 194 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 PSMC6P62333 389 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 BEX3Q00994 111 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 GOLGA8FQ08AF8 430 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 MTX1Q13505 466 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 IL13RA2Q14627 380 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 LPAL2Q16609 132 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 SMTNL2Q2TAL5 461 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 AP5B1Q2VPB7 878 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 C5orf22Q49AR2 442 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 STPG1Q5TH74 334 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 FAM171A1Q5VUB5 890 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 JAKMIP3Q5VZ66 844 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 NAPEPLDQ6IQ20 393 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 RETSATQ6NUM9 610 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 ADGRD2Q7Z7M1 963 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 PIP4P1Q86T03 277 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 PIM3Q86V86 326 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 SCAIQ8N9R8 606 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 NAXEQ8NCW5 288 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 ADAMTS15Q8TE58 950 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 EME1Q96AY2 570 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 SH3KBP1Q96B97 665 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 MSI2Q96DH6 328 aaKnown RBP3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 ZFYVE19Q96K21 471 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 C12orf42Q96LP6 360 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 PPM1MQ96MI6 270 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 FRG2BQ96QU4 278 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 WDR83Q9BRX9 315 aaKnown RBP3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 FOXP1Q9H334 677 aaPredicted RBP3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 MSRB1Q9NZV6 116 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 ANKMY1Q9P2S6 941 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 WNT16Q9UBV4 365 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 SUFUQ9UMX1 484 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 OSGIN2Q9Y236 505 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 ATAD5Q96QE3 1844 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms